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||10:30 - 10:45 ||'''break''' || || || ||10:45 - 11:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject]] ||talk || Allison Stevens || ||11:45 - 12:45 ||'''Lunch''' ||-- ||-- || ##||''12:45 - 1:15'' ||''Optional Lunch Talk''- '' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|&do=get|A Non-physicist's Intro to MR]] '' ||''talk'' ||''Dylan Tisdall'' || ||12:45 - 1:15 ||Tkmedit/Tksurfer demonstration ||demo || Nick Schmansky || ||1:15 - 2:15 ||[[FsTutorial/OutputData|Interaction with Individual Subject Data Tutorial]] ||tutorial ||staff || ||2:15 - 2:30 ||'''break''' || || || ||2:30- 3:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.ppt|Failure Modes|&do=get]] ||talk || Allison Stevens || ||3:00 - 4:00 ||Troubleshooting Demonstration, [[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff, Allison || |
||10:30 - 11:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.ppt|FreeSurfer Applications|&do=get]] ||talk || Nick Schmansky || ||11:00 - 11:30 ||'''break''' || || || ||11:30 - 12:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject]] ||talk || Allison Stevens || ||12:30 - 1:30 ||'''Lunch''' ||-- ||-- || ||1:30 - 2:00 ||Tkmedit/Tksurfer demonstration ||demo || Nick Schmansky || ||2:00 - 3:00 ||[[FsTutorial/OutputData|Interaction with Individual Subject Data Tutorial]] ||tutorial ||staff || ||3:00 - 3:30 ||'''break''' || || || ||3:30- 4:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.ppt|Failure Modes|&do=get]] ||talk || Allison Stevens || |
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||4:30 - 5:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.ppt|FreeSurfer Applications|&do=get]] ||talk || Nick Schmansky || | ||4:30 - 5:30 ||Troubleshooting Demonstration, [[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff, Allison || |
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=== Sunday, 17 April - Longitudinal / Registration / ROIs /Diffusion === | === Sunday, 17 April - Group Analysis / Registration / Longitudinal / ROIs === |
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||9:00 - 9:45 || Registration Methods || talk || Lilla Zollei || ||9:45 - 10:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer|&do=get]] ''see also:'' LongitudinalProcessing ||talk || Lilla Zollei || ||10:15 - 10:30 ||'''break''' || || || ||10:30 - 10:45 ||[[FsTutorial/LongitudinalTutorial|Longitudinal Tutorial]] ||tutorial ||staff || ||10:45 -11:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] ||talk || Allison Stevens || ||11:15 - 11:45 ||[[FsTutorial/AnatomicalROI|ROI Analysis Tutorial]] ||tutorial ||staff || ||11:45 - 1:00 ||'''Lunch''' ||-- ||-- || ##||''1:15 - 1:45'' ||''Optional Lunch Talk''- ''[[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|&do=get|MRI Acquisition Methods for Morphometry]]'' ||''talk'' ||''Andre van der Kouwe'' || ||1:00 - 2:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.dt_recon-intro.ppt|Diffusion Data Processing|&do=get]] ||talk ||Lilla Zollei || ||2:15 - 2:30 ||'''break''' || || || ||2:30 - 3:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.dt_recon-intro.ppt|Diffusion Data Processing|&do=get]] ||talk ||Lilla Zollei || ||3:00 - 4:00 ||[[FsTutorial/Diffusion|Diffusion Processing Tutorial]] ||tutorial ||staff || === Monday, 18 April - Group Analysis / Q&A === |
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##||''12:40 - 1:00'' ||''Optional Lunch Talk''- ''[[http://surfer.nmr.mgh.harvard.edu/pub/docs/tisdall_moco.pdf|Motion-compensated neuroanatomical imaging|&do=get]]'' ||''talk'' ||''Dylan Tisdall'' || ||1:00 - 2:15 ||TBD ||TBD ||TBD || ||2:15 - 2:30 ||'''break''' & Evaluation || || || ||2:30 - 3:30 ||TBD ||TBD ||TBD || ##||2:15 - 3:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration|&do=get]] ||talk ||Doug Greve || ##||3:30 - 4:30 ||[[FsTutorial/MultiModal|Multi-Modal Integration Tutorial]] ||tutorial ||staff || ||3:30 - 4:00 ||Question and Answer Session, FsQuiz ||talk ||staff || |
||1:00 - 1:45 || Registration Methods || talk || Lilla Zollei || ||1:45 - 2:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer|&do=get]] ''see also:'' LongitudinalProcessing ||talk || Lilla Zollei || ||2:15 - 2:30 ||'''break''' || || || ||2:30 - 3:30 ||[[FsTutorial/LongitudinalTutorial|Longitudinal Tutorial]] ||tutorial ||staff || ||3:30 - 4:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] ||talk || Allison Stevens || ||4:00 - 4:30 ||[[FsTutorial/AnatomicalROI|ROI Analysis Tutorial]] ||tutorial ||staff || === Monday, 18 April - Diffusion / Q&A === ||'''Time''' ||'''Title''' ||'''Type''' ||'''Lecturer''' || ||9:00 - 9:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.dt_recon-intro.ppt|Diffusion Data Processing|&do=get]] ||talk ||Lilla Zollei || ||9:30 - 10:30 ||[[FsTutorial/Diffusion|Diffusion Processing Tutorial]] ||tutorial ||staff || ||10:30 - 11:00 ||'''break''' || || || ||11:00 - 11:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] ||talk ||Lilla Zollei|| ||11:30 - 12:30 ||[[FsTutorial/Tracula|Tracula Tutorial]] ||tutorial ||staff || ||12:30 - 1:30 ||'''Lunch''' ||-- ||-- || ||1:30 - 2:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_basics.pdf|A Non-physicist's Intro to MR|&do=get]] [[http://www.heartvista.com/SpinBench|SpinBench]] ||talk || Andre van der Kouwe|| ||1:30 - 2:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|&do=get|MRI Acquisition Methods for Morphometry]] ||talk ||Andre van der Kouwe|| ||2:30 - 3:00 ||'''break''' & Evaluation || || || ||3:00 - 3:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/tisdall_moco.pdf|Motion-compensated neuroanatomical imaging|&do=get]] ||talk ||Andre van der Kouwe|| ||3:30 - 4:00 ||[[http://itunes.apple.com/us/app/isurf-brainview/id381072423?mt=8|iSurf]] and FreeSurfer Applications ||talk ||Pedro Paulo de M. Oliveira Jr. || ||4:00 - 5:00 ||Question and Answer Session, FsQuiz ||talk ||staff || |
FreeSurfer Tutorial and Workshop in São Paulo, Brazil
16, 17, & 18 (Sat.,Sun.,Mon.) April 2011
The FreeSurfer Development Team is hosting a three-day course for beginner and experienced users of FreeSurfer. Topics are listed below. There are 40 available spots for this course (see course registration).
Computers will be provided to all pairs of registrants, which will have FreeSurfer and data already installed. Attendees will work in pairs (sharing a computer).
The course will be held at São Paulo healthcare complex of HCFMUSP.
Contact: Pedro Paulo de M. Oliveira Jr. ( ppj at netfilter dot com dot br )
Location
Hospital das Clínicas - Avenida Dr Eneas de Carvalho Aguiar, 44 - São Paulo - SP - Brazil - (hotel,map)
The course will be held at the Radiology Center Building, in the Amphitheatre C.
Saturday, 16 April - Introduction / Single Subject / Troubleshooting
Time |
Title |
Type |
Lecturer |
8:30 - 9:00 |
Course Registration |
sign-in |
|
9:00 - 9:30 |
tutorial |
Pedro Paulo de M. Oliveira Jr. |
|
9:30 - 10:00 |
talk |
Pedro Paulo de M. Oliveira Jr. |
|
10:00 - 10:30 |
talk |
Nick Schmansky |
|
10:30 - 11:00 |
talk |
Nick Schmansky |
|
11:00 - 11:30 |
break |
|
|
11:30 - 12:30 |
talk |
Allison Stevens |
|
12:30 - 1:30 |
Lunch |
-- |
-- |
1:30 - 2:00 |
Tkmedit/Tksurfer demonstration |
demo |
Nick Schmansky |
2:00 - 3:00 |
tutorial |
staff |
|
3:00 - 3:30 |
break |
|
|
3:30- 4:00 |
talk |
Allison Stevens |
|
4:00 - 4:30 |
Quality Checking a Recon |
demo |
Allison Stevens |
4:30 - 5:30 |
Troubleshooting Demonstration, Troubleshooting Tutorial |
tutorial |
staff, Allison |
Sunday, 17 April - Group Analysis / Registration / Longitudinal / ROIs
Time |
Title |
Type |
Lecturer |
9:00 - 10:00 |
talk |
Lilla Zollei |
|
10:00 - 10:30 |
QDEC demonstration |
demo |
Nick Schmansky |
10:30 - 10:45 |
break |
|
|
10:45 - 11:45 |
tutorial |
staff |
|
10:45 - 11:45 |
tutorial |
staff |
|
11:45 - 1:00 |
Lunch |
-- |
-- |
1:00 - 1:45 |
Registration Methods |
talk |
Lilla Zollei |
1:45 - 2:15 |
talk |
Lilla Zollei |
|
2:15 - 2:30 |
break |
|
|
2:30 - 3:30 |
tutorial |
staff |
|
3:30 - 4:00 |
talk |
Allison Stevens |
|
4:00 - 4:30 |
tutorial |
staff |
Monday, 18 April - Diffusion / Q&A
Time |
Title |
Type |
Lecturer |
9:00 - 9:30 |
talk |
Lilla Zollei |
|
9:30 - 10:30 |
tutorial |
staff |
|
10:30 - 11:00 |
break |
|
|
11:00 - 11:30 |
talk |
Lilla Zollei |
|
11:30 - 12:30 |
tutorial |
staff |
|
12:30 - 1:30 |
Lunch |
-- |
-- |
1:30 - 2:30 |
talk |
Andre van der Kouwe |
|
1:30 - 2:30 |
talk |
Andre van der Kouwe |
|
2:30 - 3:00 |
break & Evaluation |
|
|
3:00 - 3:30 |
talk |
Andre van der Kouwe |
|
3:30 - 4:00 |
iSurf and FreeSurfer Applications |
talk |
Pedro Paulo de M. Oliveira Jr. |
4:00 - 5:00 |
Question and Answer Session, FsQuiz |
talk |
staff |