Index
Contents
BrainPET
HI
Aether-Mirror Version
PseudoCT mu-map generation
This function generates pseudoCT mu-map using SPM8 atlas-based method (David Izquierdo-Garcia et al.)
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Edit conflict - other version:
Bullet list
- item 1
- item 2, with gap
- item 3
- item 3.1
perl brainPET_pCT_AeMir.pl -i /<DIR>/<SUJID>/MR/MPRAGE -f 107000-000005-000001.dcm -c 0
Edit conflict - your version:
Bullet list
- item 1
perl brainPET_pCT_AeMir.pl -i /<DIR>/<SUJID>/MR/MPRAGE -f 107000-000005-000001.dcm -c 0
- item 2
End of edit conflict
Supporting Functions
Denoise MPRAGE
perl brainPET_denoise_mprage.pl -i /<DIR>/<SUBJID>/MR_PET/cp_iso_mprage.nii -t 25 -s 0
ifile2nifti
perl brainPET_ifile2nifti.pl -i /<DIR>/file.i