Index

Contents

  1. BrainPET
  2. Aether-Mirror Version
    1. PseudoCT mu-map generation
  3. Supporting Functions
    1. Denoise MPRAGE
    2. ifile2nifti
  4. Development Version

BrainPET

HI

Aether-Mirror Version

PseudoCT mu-map generation

This function generates pseudoCT mu-map using SPM8 atlas-based method (David Izquierdo-Garcia et al.) 

perl brainPET_

Supporting Functions

Denoise MPRAGE

perl brainPET_denoise_mprage.pl -i /<DIR>/<SUBJID>/MR_PET/cp_iso_mprage.nii -t 25 -s 0

ifile2nifti

perl brainPET_ifile2nifti.pl -i /<DIR>/file.i

Development Version