Easyfreesurfer is a simple script which was written to simplify and automate most freesurfer processes. It controls some commands such as; recon-all and mri_convert without writing any command in terminal, hence user will only need to use mouse to select options and click buttons. 
Two scripts have been written, first one is '''applescript''' which works with both shell types '''bash''' and '''tcsh''' but it is suitable for '''Mac OS X''' only. The other one is a '''(bash script)''' that works on Mac OS X and Linux. 

'''1- Applescript'''

Please click on the link below to download script:

[[http://www.nitrc.org/frs/download.php/4342/Easy_Freesurfer.zip|Easy_Freesurfer]]

[[attachment:easyfreesurfer_help.pdf]]
[[http://www.youtube.com/watch?v=EY8beEgrhVk|The illustration video]]


    '''multi mri_convert'''

Please click on the link below to download script:

[[attachment:Multiple mri_convert.zip]]
[[http://www.youtube.com/watch?v=c5EiDUTKOdI|The illustration video]]


'''***********************************************************************************************************'''

'''2- Bash script'''
Please click on the link below to download script:

[[http://www.nitrc.org/frs/download.php/4669/easyfreesurfer_bash.zip|Easy_Freesurfer_bash]]

For using this script, which works on both Linux and MAC, user needs to copy this script to data directory and execute it from there. 
Bash script works on bash shell only where "chmod +x" command used to make it executable as following;

chmod +x easyfreesurfer_bash.command 

or

chmod +x easyfreesurfer_bash.sh