Differences between revisions 21 and 22

FreeSurfer File Formats

FreeSurfer creates its own file formats for storing and manipulating volumetric, surface and transform data, including mgh, mgz, gca, bshort, bfloat, COR, surface, curv, w, annot, patch, gcs, dat, xfm, m3d and lta. These FreeSurfer native formats are summarized below, along with some closely-related external image formats.

1.0 FreeSurfer Native Formats

1.1 Volume

COR
bshort
bfloat
mgh/mgz
gca

1.2 Surface

FreeSurfer Surface File Formats FreeSurfer formats for the surfaces themselves, and also for vertex-wise data in 'curv' and 'W' formats.
Surface registration template "tif" content and format: TemplateTifImageFiles

1.3 Transform

dat
xfm
m3d
[[FsTutorial/LtaFormat]|lta]

2.0 External Formats

MINC
Analyze
DICOM
See also: MRI Image file formats (volume or slices)

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