Differences between revisions 1 and 6 (spanning 5 versions)

1. Index

2. Volume

2.1. VolumeConversion

["brik2bfloat"] BR ["minc_to_bshort"] BR ["mri_annotation2label"] BR ["mri_convert"] BR ["mri_convert_mdh"] BR ["mri_cor2label"] BR ["mri_label2label"] BR ["mri_surf2surf"] BR ["mri_surf2vol"] BR ["mri_vol2roi"] BR ["mri_vol2surf"] BR ["mri_volcluster"] BR ["spm2bfloat"] BR

Anchor(MotionCorrection)

2.2. MotionCorrection

Anchor(Talairach)

2.3. Talairach

Anchor(Registration)

2.4. Registration

["mri_ca_register"] BR ["mri_register"] BR ["mri_rigid_register"] BR ["mri_linear_register"] BR

Anchor(IntensityNormalization)

2.5. IntensityNormalization

["mri_normalize"] BR

Anchor(SkullStripping)

2.6. SkullStripping

Anchor(Segmentation)

2.7. Segmentation

["mri_segment"] BR

Anchor(SurfaceGeneration)

2.8. SurfaceGeneration

Anchor(Misc)

2.9. Misc

Anchor(Surface)

3. Surface

Anchor(SurfaceConversion)

3.1. SurfaceConversion

Anchor(Smoothing)

3.2. Smoothing

Anchor(Inflation)

3.3. Inflation

Anchor(TopologyFixing)

3.4. TopologyFixing

Anchor(InterSubjectMorphing)

3.5. InterSubjectMorphing

Anchor(Parcellation)

3.6. Parcellation

Anchor(Flattening)

3.7. Flattening

Anchor(SurfaceMisc)

3.8. SurfaceMisc

["mkxsubjreg"] BR ["mri_add_xform_to_header"] BR ["mri_average"] BR ["mri_ca_label"] BR ["mri_ca_normalize"] BR ["mri_ca_train"] BR ["mri_em_register"] BR ["mri_fill"] BR ["mri_gdfglm"] BR ["mri_head"] BR ["mri_info"] BR ["mri_label_volume"] BR ["mri_make_register"] BR ["mri_make_template"] BR ["mri_matrix_multiply"] BR ["mri_ms_fitparms"] BR ["mri_parse_sdcmdir"] BR ["mri_partial_ribbon"] BR ["mri_probedicom"] BR ["mri_probe_ima"] BR ["mri_relabel_hypointensities"] BR ["mri_seghead"] BR ["mri_strip_skull"] BR ["mri_surfcluster"] BR ["mri_tessellate"] BR ["mri_volsynth"] BR ["mri_wmfilter"] BR ["mri_watershed"] BR ["mri_xvolavg"] BR ["mris2rgb"] BR ["mris_anatomical_statsv"] BR ["mris_average_curvature"] BR ["mris_ca_label"] BR ["mris_ca_train"] BR ["mris_convert"] BR ["mris_curvature"] BR ["mris_euler_number"] BR ["mris_find_flat_regions"] BR ["mris_fix_topology"] BR ["mris_flatten"] BR ["mris_glm"] BR ["mris_inflate"] BR ["mris_make_average_surface"] BR ["mris_make_surfaces"] BR ["mris_make_template"] BR ["mris_register"] BR ["mris_smooth"] BR ["mris_sphere"] BR ["mris_spherical_average"] BR ["mris_thickness"] BR ["mris_twoclass"] BR ["mrisp_paint"] BR ["mri_synthesize"] BR ["nmovie"] BR ["optseq2"] BR ["paint"] BR ["stat_normalize"] BR ["vss-dump"] BR

-  ⇤ ← Revision 1 as of 2004-07-23 21:34:51 → 
  Size: 2601
  Editor: DavidTuch
  Comment:
+   ← Revision 6 as of 2004-07-28 01:41:45 → ⇥
  Size: 3095
  Editor: DavidTuch
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 1:
-  * Brik2Bfloat brik2bfloat
  * MincToBshort minc_to_bshort
  * MkXsubjReg mkxsubjreg
  * MriAddXformToHeader mri_add_xform_to_header
  * MriAnnotation2Label mri_annotation2label
  * MriAverage mri_average
  * MriCaLabel mri_ca_label
  * MriCaNormalize mri_ca_normalize
  * MriCaRegister mri_ca_register
  * MriCaTrain mri_ca_train
  * MriConvert mri_convert
  * MriConvertMdh mri_convert_mdh
  * MriCor2Label mri_cor2label
  * MriEmRegister mri_em_register
  * MriFill mri_fill
  * MriGdfGlm mri_gdfglm
  * MriHead mri_head
  * MriInfo mri_info
  * MriLabel2Label mri_label2label
  * MriLabelVolume mri_label_volume
  * MriLinearRegister mri_linear_register
  * MriMakeRegister mri_make_register
  * MriMakeTemplate mri_make_template
  * MriMatrixMultiple mri_matrix_multiply
  * MriMsFitParms mri_ms_fitparms
  * MriNormalize mri_normalize
  * MriParseSdcmDir mri_parse_sdcmdir
  * MriPartialRibbon mri_partial_ribbon
  * MriProbdeDicom mri_probedicom
  * MriProbeIma mri_probe_ima
  * MriRegister mri_register
  * MriRelabelHypointensities mri_relabel_hypointensities
  * MriRigidRegister mri_rigid_register
  * MriSegHead mri_seghead
  * MriSegment mri_segment
  * MriStripSkull mri_strip_skull
  * MriSurf2Surf mri_surf2surf
  * MriSurf2Vol mri_surf2vol
  * MriSurfCluster mri_surfcluster
  * MriTessellate mri_tessellate
  * MriVol2Roi mri_vol2roi
  * MriVol2Surf mri_vol2surf
  * MriVolCluster mri_volcluster
  * MriVolSynth mri_volsynth
  * MriWmFilter mri_wmfilter
  * MriWatershed mri_watershed
  * MriXvolAvg mri_xvolavg
  * Mris2Rgb mris2rgb
  * MrisAnatomicalStats mris_anatomical_stats
  * MrisAverageCurvature mris_average_curvature
  * MrisCaLabel mris_ca_label
  * MrisCaTrain mris_ca_train
  * MrisConvert mris_convert
  * MrisCurvature mris_curvature
  * MrisEulerNumber mris_euler_number
  * MrisFindFlatRegions mris_find_flat_regions
  * MrisFixTopology mris_fix_topology
  * MrisFlatten mris_flatten
  * MrisGlm mris_glm
  * MrisInflate mris_inflate
  * MrisMakeAvergeSurface mris_make_average_surface
  * MrisMakeSurfaces mris_make_surfaces
  * MrisMakeTemplate mris_make_template
  * MrisRegister mris_register
  * MrisSmooth mris_smooth
  * MrisSphere mris_sphere
  * MrisSphericalAverage mris_spherical_average
  * MrisThickness mris_thickness
  * MrisTwoClass mris_twoclass
  * MrispPaint mrisp_paint
  * MriSynthesize mri_synthesize
  * NMovie nmovie
  * OptSeq2 optseq2
  * Paint paint
  * Spm2Bfloat spm2bfloat
  * StatCombine statcombine
  * StatNormalize stat_normalize
  * VssDump vss-dump
+#pragma section-numbers on

= Index =

[[Navigation(children)]]
[[TableOfContents]]

[[Anchor(Volume)]]
= Volume =

[[Anchor(VolumeConversion)]]
== VolumeConversion ==

["brik2bfloat"] [[BR]]
["minc_to_bshort"] [[BR]]
["mri_annotation2label"] [[BR]]
["mri_convert"] [[BR]]
["mri_convert_mdh"] [[BR]]
["mri_cor2label"] [[BR]]
["mri_label2label"] [[BR]]
["mri_surf2surf"] [[BR]]
["mri_surf2vol"] [[BR]]
["mri_vol2roi"] [[BR]]
["mri_vol2surf"] [[BR]]
["mri_volcluster"] [[BR]]
["spm2bfloat"] [[BR]]

[[Anchor(MotionCorrection)]]
== MotionCorrection ==

[[Anchor(Talairach)]]
== Talairach ==

[[Anchor(Registration)]]
== Registration ==
["mri_ca_register"] [[BR]]
["mri_register"] [[BR]]
["mri_rigid_register"] [[BR]]
["mri_linear_register"] [[BR]]

[[Anchor(IntensityNormalization)]]
== IntensityNormalization ==
["mri_normalize"] [[BR]]

[[Anchor(SkullStripping)]]
== SkullStripping ==

[[Anchor(Segmentation)]]
== Segmentation ==
["mri_segment"] [[BR]]

[[Anchor(SurfaceGeneration)]]
== SurfaceGeneration ==

[[Anchor(Misc)]]
== Misc ==

[[Anchor(Surface)]]
= Surface =

[[Anchor(SurfaceConversion)]]
== SurfaceConversion ==

[[Anchor(Smoothing)]]
== Smoothing ==

[[Anchor(Inflation)]]
== Inflation ==

[[Anchor(TopologyFixing)]]
== TopologyFixing ==

[[Anchor(InterSubjectMorphing)]]
== InterSubjectMorphing ==

[[Anchor(Parcellation)]]
== Parcellation ==

[[Anchor(Flattening)]]
== Flattening ==

[[Anchor(SurfaceMisc)]]
== SurfaceMisc ==

["mkxsubjreg"] [[BR]]
["mri_add_xform_to_header"] [[BR]]
["mri_average"] [[BR]]
["mri_ca_label"] [[BR]]
["mri_ca_normalize"] [[BR]]
["mri_ca_train"] [[BR]]
["mri_em_register"] [[BR]]
["mri_fill"] [[BR]]
["mri_gdfglm"] [[BR]]
["mri_head"] [[BR]]
["mri_info"] [[BR]]
["mri_label_volume"] [[BR]]
["mri_make_register"] [[BR]]
["mri_make_template"] [[BR]]
["mri_matrix_multiply"] [[BR]]
["mri_ms_fitparms"] [[BR]]
["mri_parse_sdcmdir"] [[BR]]
["mri_partial_ribbon"] [[BR]]
["mri_probedicom"] [[BR]]
["mri_probe_ima"] [[BR]]
["mri_relabel_hypointensities"] [[BR]]
["mri_seghead"] [[BR]]
["mri_strip_skull"] [[BR]]
["mri_surfcluster"] [[BR]]
["mri_tessellate"] [[BR]]
["mri_volsynth"] [[BR]]
["mri_wmfilter"] [[BR]]
["mri_watershed"] [[BR]]
["mri_xvolavg"] [[BR]]
["mris2rgb"] [[BR]]
["mris_anatomical_statsv"] [[BR]]
["mris_average_curvature"] [[BR]]
["mris_ca_label"] [[BR]]
["mris_ca_train"] [[BR]]
["mris_convert"] [[BR]]
["mris_curvature"] [[BR]]
["mris_euler_number"] [[BR]]
["mris_find_flat_regions"] [[BR]]
["mris_fix_topology"] [[BR]]
["mris_flatten"] [[BR]]
["mris_glm"] [[BR]]
["mris_inflate"] [[BR]]
["mris_make_average_surface"] [[BR]]
["mris_make_surfaces"] [[BR]]
["mris_make_template"] [[BR]]
["mris_register"] [[BR]]
["mris_smooth"] [[BR]]
["mris_sphere"] [[BR]]
["mris_spherical_average"] [[BR]]
["mris_thickness"] [[BR]]
["mris_twoclass"] [[BR]]
["mrisp_paint"] [[BR]]
["mri_synthesize"] [[BR]]
["nmovie"] [[BR]]
["optseq2"] [[BR]]
["paint"] [[BR]]
["stat_normalize"] [[BR]]
["vss-dump"] [[BR]]