Differences between revisions 3 and 4

1. Volume

1.1. VolumeConversion

["brik2bfloat"] BR ["minc_to_bshort"] BR ["mri_annotation2label"] BR ["mri_convert"] BR ["mri_convert_mdh"] BR ["mri_cor2label"] BR ["mri_label2label"] BR ["mri_surf2surf"] BR ["mri_surf2vol"] BR ["mri_vol2roi"] BR ["mri_vol2surf"] BR ["mri_volcluster"] BR ["spm2bfloat"] BR

Anchor(MotionCorrection)

1.2. MotionCorrection

Anchor(Talairach)

1.3. Talairach

Anchor(Registration)

1.4. Registration

["mri_ca_register"] BR ["mri_register"] BR ["mri_rigid_register"] BR ["mri_linear_register"] BR

Anchor(IntensityNormalization)

1.5. IntensityNormalization

["mri_normalize"] BR

Anchor(SkullStripping)

1.6. SkullStripping

Anchor(Segmentation)

1.7. Segmentation

["mri_segment"] BR

Anchor(SurfaceGeneration)

1.8. SurfaceGeneration

Anchor(Misc)

1.9. Misc

Anchor(Surface)

2. Surface

Anchor(SurfaceConversion)

3. SurfaceConversion

Anchor(Smoothing)

3.1. Smoothing

Anchor(Inflation)

3.2. Inflation

Anchor(TopologyFixing)

3.3. TopologyFixing

Anchor(InterSubjectMorphing)

3.4. InterSubjectMorphing

Anchor(Parcellation)

3.5. Parcellation

Anchor(Flattening)

3.6. Flattening

Anchor(SurfaceMisc)

3.7. Misc

["mkxsubjreg"] BR ["mri_add_xform_to_header"] BR ["mri_average"] BR ["mri_ca_label"] BR ["mri_ca_normalize"] BR ["mri_ca_train"] BR ["mri_em_register"] BR ["mri_fill"] BR ["mri_gdfglm"] BR ["mri_head"] BR ["mri_info"] BR ["mri_label_volume"] BR ["mri_make_register"] BR ["mri_make_template"] BR ["mri_matrix_multiply"] BR ["mri_ms_fitparms"] BR ["mri_parse_sdcmdir"] BR ["mri_partial_ribbon"] BR ["mri_probedicom"] BR ["mri_probe_ima"] BR ["mri_relabel_hypointensities"] BR ["mri_seghead"] BR ["mri_strip_skull"] BR ["mri_surfcluster"] BR ["mri_tessellate"] BR ["mri_volsynth"] BR ["mri_wmfilter"] BR ["mri_watershed"] BR ["mri_xvolavg"] BR ["mris2rgb"] BR ["mris_anatomical_statsv"] BR ["mris_average_curvature"] BR ["mris_ca_label"] BR ["mris_ca_train"] BR ["mris_convert"] BR ["mris_curvature"] BR ["mris_euler_number"] BR ["mris_find_flat_regions"] BR ["mris_fix_topology"] BR ["mris_flatten"] BR ["mris_glm"] BR ["mris_inflate"] BR ["mris_make_average_surface"] BR ["mris_make_surfaces"] BR ["mris_make_template"] BR ["mris_register"] BR ["mris_smooth"] BR ["mris_sphere"] BR ["mris_spherical_average"] BR ["mris_thickness"] BR ["mris_twoclass"] BR ["mrisp_paint"] BR ["mri_synthesize"] BR ["nmovie"] BR ["optseq2"] BR ["paint"] BR ["stat_normalize"] BR ["vss-dump"] BR

-Deletions are marked like this.
+Additions are marked like this.
 Line 4:
-[[Anchor(Conversion)]]

== Conversion ==
+[[Anchor(VolumeConversion)]]

== VolumeConversion ==

["brik2bfloat"] [[BR]]

["minc_to_bshort"] [[BR]]

["mri_annotation2label"] [[BR]]

["mri_convert"] [[BR]]

["mri_convert_mdh"] [[BR]]

["mri_cor2label"] [[BR]]

["mri_label2label"] [[BR]]

["mri_surf2surf"] [[BR]]

["mri_surf2vol"] [[BR]]

["mri_vol2roi"] [[BR]]

["mri_vol2surf"] [[BR]]

["mri_volcluster"] [[BR]]

["spm2bfloat"] [[BR]]
-Line 10:
+Line 23:
-[[Anchor(Talairach )]]
+[[Anchor(Talairach)]]
-Line 13:
+Line 26:
-[[Anchor(Registration )]]
+[[Anchor(Registration)]]
-Line 15:
+Line 28:
+["mri_ca_register"] [[BR]]

["mri_register"] [[BR]]

["mri_rigid_register"] [[BR]]

["mri_linear_register"] [[BR]]
-Line 16:
+Line 33:
-[[Anchor(IntensityNormalization )]]
+[[Anchor(IntensityNormalization)]]
-Line 18:
+Line 35:
+["mri_normalize"] [[BR]]
-Line 19:
+Line 37:
-[[Anchor(SkullStripping )]]
+[[Anchor(SkullStripping)]]
-Line 24:
+Line 42:
+["mri_segment"] [[BR]]
-Line 33:
+Line 52:
+[[Anchor(SurfaceConversion)]]

= SurfaceConversion =
-Line 55:
+Line 77:
-["brik2bfloat"] [[BR]]

["minc_to_bshort"] [[BR]]
-Line 59:
+Line 79:
-["mri_annotation2label"] [[BR]]
-Line 63:
+Line 82:
-["mri_ca_register"] [[BR]]
-Line 65:
+Line 83:
-["mri_convert"] [[BR]]

["mri_convert_mdh"] [[BR]]

["mri_cor2label"] [[BR]]
-Line 73:
+Line 88:
-["mri_label2label"] [[BR]]
-Line 75:
+Line 89:
-["mri_linear_register"] [[BR]]
-Line 80:
+Line 93:
-["mri_normalize"] [[BR]]
-Line 85:
+Line 97:
-["mri_register"] [[BR]]
-Line 87:
+Line 98:
-["mri_rigid_register"] [[BR]]
-Line 89:
+Line 99:
-["mri_segment"] [[BR]]
-Line 91:
+Line 100:
-["mri_surf2surf"] [[BR]]

["mri_surf2vol"] [[BR]]
-Line 95:
+Line 102:
-["mri_vol2roi"] [[BR]]

["mri_vol2surf"] [[BR]]

["mri_volcluster"] [[BR]]
-Line 129:
+Line 133:
-["spm2bfloat"] [[BR]]