1. Index

Navigation(children) TableOfContents

Anchor(Volume)

2. Volume

Anchor(VolumeConversion)

2.1. VolumeConversion

["brik2bfloat"] BR ["minc_to_bshort"] BR ["mri_annotation2label"] BR ["mri_convert"] BR ["mri_convert_mdh"] BR ["mri_cor2label"] BR ["mri_label2label"] BR ["mri_surf2surf"] BR ["mri_surf2vol"] BR ["mri_vol2roi"] BR ["mri_vol2surf"] BR ["mri_volcluster"] BR ["spm2bfloat"] BR

Anchor(MotionCorrection)

2.2. MotionCorrection

Anchor(Talairach)

2.3. Talairach

Anchor(Registration)

2.4. Registration

["mri_ca_register"] BR ["mri_register"] BR ["mri_rigid_register"] BR ["mri_linear_register"] BR

Anchor(IntensityNormalization)

2.5. IntensityNormalization

["mri_normalize"] BR

Anchor(SkullStripping)

2.6. SkullStripping

Anchor(Segmentation)

2.7. Segmentation

["mri_segment"] BR

Anchor(SurfaceGeneration)

2.8. SurfaceGeneration

Anchor(Misc)

2.9. Misc

Anchor(Surface)

3. Surface

Anchor(SurfaceConversion)

3.1. SurfaceConversion

Anchor(Smoothing)

3.2. Smoothing

Anchor(Inflation)

3.3. Inflation

Anchor(TopologyFixing)

3.4. TopologyFixing

Anchor(InterSubjectMorphing)

3.5. InterSubjectMorphing

Anchor(Parcellation)

3.6. Parcellation

Anchor(Flattening)

3.7. Flattening

Anchor(SurfaceMisc)

3.8. SurfaceMisc

["mkxsubjreg"] BR ["mri_add_xform_to_header"] BR ["mri_average"] BR ["mri_ca_label"] BR ["mri_ca_normalize"] BR ["mri_ca_train"] BR ["mri_em_register"] BR ["mri_fill"] BR ["mri_gdfglm"] BR ["mri_head"] BR ["mri_info"] BR ["mri_label_volume"] BR ["mri_make_register"] BR ["mri_make_template"] BR ["mri_matrix_multiply"] BR ["mri_ms_fitparms"] BR ["mri_parse_sdcmdir"] BR ["mri_partial_ribbon"] BR ["mri_probedicom"] BR ["mri_probe_ima"] BR ["mri_relabel_hypointensities"] BR ["mri_seghead"] BR ["mri_strip_skull"] BR ["mri_surfcluster"] BR ["mri_tessellate"] BR ["mri_volsynth"] BR ["mri_wmfilter"] BR ["mri_watershed"] BR ["mri_xvolavg"] BR ["mris2rgb"] BR ["mris_anatomical_statsv"] BR ["mris_average_curvature"] BR ["mris_ca_label"] BR ["mris_ca_train"] BR ["mris_convert"] BR ["mris_curvature"] BR ["mris_euler_number"] BR ["mris_find_flat_regions"] BR ["mris_fix_topology"] BR ["mris_flatten"] BR ["mris_glm"] BR ["mris_inflate"] BR ["mris_make_average_surface"] BR ["mris_make_surfaces"] BR ["mris_make_template"] BR ["mris_register"] BR ["mris_smooth"] BR ["mris_sphere"] BR ["mris_spherical_average"] BR ["mris_thickness"] BR ["mris_twoclass"] BR ["mrisp_paint"] BR ["mri_synthesize"] BR ["nmovie"] BR ["optseq2"] BR ["paint"] BR ["stat_normalize"] BR ["vss-dump"] BR