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= FreeSurfer Work Flows =

FreeSurferWorkFlows describes processing workflows for !FreeSurfer. An overview of the major processing steps taking place in a standard !FreeSurfer workflow are described in this PDF slide presentation: [[http://surfer.nmr.mgh.harvard.edu/docs/ftp/pub/docs/freesurfer.intro.pdf|Building Anatomical Models with Freesurfer]], and also FreeSurferAnalysisPipelineOverview.

For more detail on how to use !FreeSurfer, look through the tutorials we offer on the FsTutorial page.

FreeSurferWorkFlows include:

 * FsFastUnpackData 
 * RecommendedReconstruction (with routine checks for automated program failures, and subsequent manual intervention)
 * LongitudinalProcessing
 * FreeSurferGroupAnalysis
 * FreeSurferOccipitalFlattenedPatch
 * VolumeRoiCorticalThickness
 * PairedAnalysis