Differences between revisions 4 and 5
Deletions are marked like this. Additions are marked like this.
Line 18: Line 18:

After loading the inital volume, other volumes can either be added or loaded from the open Freeview window.

To load a new volume:
Go to '''File'''>'''New Volume''' or click the new volume icon on the toolbar. Enter the name of the new volume in the standardized format, and make sure the selected template volume is the original volume.

To open a previously saved volume:
Go to '''File'''>'''Load Volume''', press Ctrl+O, or click the load volume icon on the toolbar. The correct volume may be selected to open by navigating through the directory in the Load Volume dialogue box. Select the desired saved volume, and hit "OK."

Up to FreeviewGuide

Back to FreeviewGeneralUsage

Continue to FreeviewInterface

Quick Start

Freeview is started by invoking it from the command line. The user must first source the developmental (updated regularly) version of Freesurfer by opening a terminal window and typing (or copy-pasting) this command:

source  /usr/local/freesurfer/nmr-dev-env

The user must next navigate to the directory in which the volume is saved in order to open it. Example:

cd /autofs/space/rainbow_002/users/hires/FHS19_ec_amyg_032808/mri/flash

Be sure to type the command sp in order to set this directory as the one in which to save changes and/or new volumes. After that, open the desired volume using the command:

freeview -v volumename.mgz

After loading the inital volume, other volumes can either be added or loaded from the open Freeview window.

To load a new volume: Go to File>New Volume or click the new volume icon on the toolbar. Enter the name of the new volume in the standardized format, and make sure the selected template volume is the original volume.

To open a previously saved volume: Go to File>Load Volume, press Ctrl+O, or click the load volume icon on the toolbar. The correct volume may be selected to open by navigating through the directory in the Load Volume dialogue box. Select the desired saved volume, and hit "OK."

FreeviewGuide/FreeviewGeneralUsage/FreeviewQuickStart (last edited 2013-11-12 13:02:01 by MaritzaEbling)