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Index Navigation(children) TableOfContents

Download the sample subject’s data

Get to know the Sessions Format

Make a directory for your Study

Make paradigm files for your experiment

Motion correct the data using “mc-sess”

Normalize signal intensity using “inorm-sess”

Set up session-level analysis using “mkanalysis-sessnew”

Average session-level data by condition using “selxavg-sess”

Define an omnibus contrast using “mkcontrast-sess”

Compute statistical maps of the omnibus contrast using “stxgrinder-sess”

Run functional/structural registration using “autoreg-sess”

Interfacing with FreeSurfer

Functional/Anatomical Registration

Visualization

Visualization: slice-based using “sliceview-sess”

Viewing Bert’s hemodynamic responses

Visualization: surface-based using “paint-sess” and “surf-sess”