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#pragma section-numbers on = FsFast Tutorial SlideShow =
[[Navigation(slideshow)]]
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'''Index'''

[[
TableOfContents]]


=
Download the sample subject’s data =
=
Get to know the Sessions Format =
=
Make a directory for your Study =
=
Make paradigm files for your experiment =
=
Motion correct the data using “mc-sess” =
=
Normalize signal intensity using “inorm-sess” =
=
Set up session-level analysis using “mkanalysis-sessnew” =
=
Average session-level data by condition using “selxavg-sess” =
=
Define an omnibus contrast using “mkcontrast-sess” =
=
Compute statistical maps of the omnibus contrast using “stxgrinder-sess” =
=
Run functional/structural registration using “autoreg-sess” =
= Interfacing with FreeSurfer =
= Functional/Anatomical Registration =
=
Visualization =
== Visualization: slice-based using “sliceview-sess” ==
== Viewing Bert’s hemodynamic responses ==
== Visualization: surface-based using “paint-sess” and “surf-sess” ==
 * ["/000 Frontmatter"]
 * ["/100 FsFast
Tutorial at a glance"]
 * ["/200 Using FsFast: a step
by step guide"]
 * ["/300
Download the sample subject’s data"]
 * ["/400
Get to know the Sessions Format"]
 * ["/500
Make a directory for your Study"]
 * ["/600
Make paradigm files for your experiment"]
 * ["/700
Motion correct the data using mc-sess"]
 * ["/800
Normalize signal intensity using inorm-sess"]
 * ["/900
Set up session-level analysis using mkanalysis-sessnew"]
 * ["/1000
Average session-level data by condition using selxavg-sess"]
 * ["/1100
Define an omnibus contrast using mkcontrast-sess"]
 * ["/1200
Compute statistical maps of the omnibus contrast using stxgrinder-sess"]
 * ["/1300
Run functional/structural registration using autoreg-sess"]
 * ["/1400
Visualization"]

FsFast Tutorial SlideShow

Navigation(slideshow)

  • ["/000 Frontmatter"]
  • ["/100 FsFast Tutorial at a glance"]

  • ["/200 Using FsFast: a step by step guide"]

  • ["/300 Download the sample subject’s data"]
  • ["/400 Get to know the Sessions Format"]
  • ["/500 Make a directory for your Study"]
  • ["/600 Make paradigm files for your experiment"]
  • ["/700 Motion correct the data using mc-sess"]
  • ["/800 Normalize signal intensity using inorm-sess"]
  • ["/900 Set up session-level analysis using mkanalysis-sessnew"]
  • ["/1000 Average session-level data by condition using selxavg-sess"]
  • ["/1100 Define an omnibus contrast using mkcontrast-sess"]
  • ["/1200 Compute statistical maps of the omnibus contrast using stxgrinder-sess"]
  • ["/1300 Run functional/structural registration using autoreg-sess"]
  • ["/1400 Visualization"]

FsFastTutorialV4.5 (last edited 2011-05-19 15:29:07 by NickSchmansky)