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| ||Back to [[FsTutorial/Diffusion|Diffusion]] || |
||Return to [[FsTutorial/Diffusion|Diffusion]] || Be sure to source FreeSurfer before trying to run any of the following scripts. subjects.csh DiffPreproc.csh ---- {{{#!/bin/tcsh –ef source $SUBJECTS_DIR/scripts/subjects.csh foreach subj ($SUBJECTS) echo $subj set outdir = $SUBJECTS_DIR/$subj/LZDiff mkdir -p $outdir set dicomfile = $SUBEJCTS_DIR/$subj/orig/*-1.dcm set cmd = (dt_recon --i $dicomfile --s $subj --o $outdir) echo $cmd eval $cmd end }}} ---- |
Return to Diffusion |
Be sure to source FreeSurfer before trying to run any of the following scripts.
subjects.csh
DiffPreproc.csh
{{{#!/bin/tcsh –ef source $SUBJECTS_DIR/scripts/subjects.csh
foreach subj ($SUBJECTS)
- echo $subj set outdir = $SUBJECTS_DIR/$subj/LZDiff mkdir -p $outdir set dicomfile = $SUBEJCTS_DIR/$subj/orig/*-1.dcm set cmd = (dt_recon --i $dicomfile --s $subj --o $outdir) echo $cmd eval $cmd
end }}}