Deletions are marked like this. | Additions are marked like this. |
Line 12: | Line 12: |
|| 9:30 - 10:30 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject|&do=get]] || talk|| Bruce Fischl || | || 9:30 - 10:30 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject|&do=get]] || talk|| Doug Greve || |
Line 34: | Line 34: |
|| 11:00 - 11:30 || QDEC demonstration || demo || Nick Schmansky || || 11:30 - 12:30 || [[FsTutorial/QdecGroupAnalysis|Group Analysis - qdec Tutorial]] || tutorial || staff || |
|| 11:00 - 11:15 || '''break''' || || || || 11:15 - 11:45 || QDEC demonstration || demo || Nick Schmansky || || 11:45 - 12:30 || [[FsTutorial/QdecGroupAnalysis|Group Analysis - qdec Tutorial]] || tutorial || staff || |
Line 37: | Line 38: |
|| ''12:45 - 1:15'' || ''Optional Lunch Talk''- '' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]]'' || ''talk'' || ''Bruce Fischl''|| | || ''12:45 - 1:15'' || ''Optional Lunch Talk''- ''Which What to Register'' || ''talk'' || ''Lilla Zollei''|| |
Line 42: | Line 43: |
|| 3:45 - 4:45 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.dt_recon-intro.ppt|Introduction to Diffusion Processing|&do=get]] || talk || Lilla Zollei || || 4:45 - 5:45 || Diffusion Tutorial || tutorial || staff || || 5:45 - 6:05 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] || talk || Anastasia Yendiki || || 5:30 - || '''optional -''' [[DownloadAndInstall|FreeSurfer Installation on Personal Laptops]] || one-on-one || Nick Schmansky || || 5:30 - || '''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/runningyourdata.ppt|Start Processing Your Own Data|&do=get]]|| one-on-one || Allison Stevens || |
|| 3:45 - 4:15 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.dt_recon-intro.ppt|Introduction to Diffusion Processing|&do=get]] || talk || Lilla Zollei || || 4:15 - 5:15 || Diffusion Tutorial || tutorial || staff || || 5:15 - 5:35 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] || talk || Anastasia Yendiki || || 5:35 - || '''optional -''' [[DownloadAndInstall|FreeSurfer Installation on Personal Laptops]] || one-on-one || Nick Schmansky || || 5:35 - || '''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/runningyourdata.ppt|Start Processing Your Own Data|&do=get]]|| one-on-one || Allison Stevens || |
Line 54: | Line 55: |
|| 1:00 - 2:00 || FSFAST || talk || Doug Greve || || 2:00 - 3:00 || FSFAST || tutorial || staff || || 3:00 - 3:15 || '''break''' || || || || 3:15 - 4:00 || Longitudinal tutorial; checking recon-all.log of failed subject || tutorial || staff || ||4:00 - 4:30 || Evaluation || online || attendees || ||4:30 - 5:15 || Question and Answer Session, FsQuiz || talk || staff || || 5:15 - 5:35 || Future Directions of !FreeSurfer: || || || || 5:15 - 5:35 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] || talk || Bruce Fischl || |
|| 1:00 - 1:20 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] || talk || Bruce Fischl || || 1:20 - 2:20 || FSFAST || talk || Doug Greve || || 2:20 - 3:15 || FSFAST || tutorial || staff || || 3:15 - 3:30 || '''break''' || || || || 3:30 - 4:00 || Longitudinal tutorial; checking recon-all.log of failed subject || tutorial || staff || || 4:00 - 4:30 || Evaluation || online || attendees || || 4:30 - 5:15 || Question and Answer Session, FsQuiz || talk || staff || |
FreeSurfer Course, April 4 and 5, 2010
MGH, Charlestown Navy Yard, Building 149, Conference Room A
Monday, October 4th - Introduction / Single Subject / ROIs /Group Analysis
Time |
Title |
Type |
Lecturer |
8:00 - 8:30 |
optional - Unix Tutorial for FreeSurfer Users 1. Surrey, 2. O'Reilly |
tutorial |
Allison Stevens |
8:30 - 9:00 |
optional - Intro to FreeSurfer Jargon |
talk |
Allison Stevens |
8:30 - 9:00 |
Course Registration |
sign-in |
|
9:00 - 9:30 |
talk |
Bruce Fischl |
|
9:30 - 10:30 |
talk |
Doug Greve |
|
10:30 - 10:45 |
break |
|
|
10:45 - 11:15 |
Tkmedit/Tksurfer demonstration |
demo |
Doug Greve |
11:15 - 11:45 |
tutorial |
staff |
|
11:45 - 12:15 |
talk |
Doug Greve |
|
12:15 - 1:15 |
Lunch |
-- |
-- |
12:30 - 1:00 |
Optional Lunch Talk- FreeSurfer Applications |
talk |
David Salat |
1:15 - 1:45 |
talk |
Dylan Tisdall |
|
1:45 - 2:30 |
talk |
Andre van der Kouwe |
|
2:30 - 2:45 |
break |
|
|
2:45 - 3:15 |
talk |
Martin Reuter |
|
3:15 - 3:45 |
talk |
Bruce Fischl |
|
3:45 - 4:45 |
Troubleshooting Demonstration, Troubleshooting Tutorial |
tutorial |
staff, Allison |
4:45 - 5:30 |
Quality Checking a Recon |
demo |
Allison Stevens |
5:30 - |
optional - FreeSurfer Installation on Personal Laptops |
one-on-one |
Nick Schmansky |
5:30 - |
optional - Start Processing Your Own Data |
one-on-one |
Allison Stevens |
Tuesday, October 5th - Troubleshooting / Multi-Modal / Q&A / Future Directions
Time |
Title |
Type |
Lecturer |
9:00 - 10:00 |
talk |
Mert Sabuncu |
|
10:00 - 11:00 |
tutorial |
staff |
|
11:00 - 11:15 |
break |
|
|
11:15 - 11:45 |
QDEC demonstration |
demo |
Nick Schmansky |
11:45 - 12:30 |
tutorial |
staff |
|
12:30 - 1:30 |
Lunch |
-- |
-- |
12:45 - 1:15 |
Optional Lunch Talk- Which What to Register |
talk |
Lilla Zollei |
1:30 - 2:30 |
talk |
Doug Greve |
|
2:30 - 3:00 |
tutorial |
staff |
|
3:00 - 3:30 |
talk |
Lilla Zollei |
|
3:30 - 3:45 |
break |
|
|
3:45 - 4:15 |
talk |
Lilla Zollei |
|
4:15 - 5:15 |
Diffusion Tutorial |
tutorial |
staff |
5:15 - 5:35 |
talk |
Anastasia Yendiki |
|
5:35 - |
optional - FreeSurfer Installation on Personal Laptops |
one-on-one |
Nick Schmansky |
5:35 - |
optional - Start Processing Your Own Data |
one-on-one |
Allison Stevens |
Wednesday, October 6th -
9:00 - 10:15 |
talk |
Doug Greve |
|
10:15 - 11:15 |
tutorial |
staff |
|
11:15 - 11:30 |
break |
|
|
11:30 - 12:00 |
talk |
David Salat |
|
12:00 - 1:00 |
Lunch |
-- |
-- |
1:00 - 1:20 |
talk |
Bruce Fischl |
|
1:20 - 2:20 |
FSFAST |
talk |
Doug Greve |
2:20 - 3:15 |
FSFAST |
tutorial |
staff |
3:15 - 3:30 |
break |
|
|
3:30 - 4:00 |
Longitudinal tutorial; checking recon-all.log of failed subject |
tutorial |
staff |
4:00 - 4:30 |
Evaluation |
online |
attendees |
4:30 - 5:15 |
Question and Answer Session, FsQuiz |
talk |
staff |