Diff for "FsTutorial/FreeviewDemo"

Differences between revisions 1 and 6 (spanning 5 versions)

Copy and paste the commands below to get started:

export SUBJECTS_DIR=$TUTORIAL_DATA/buckner_data/tutorial_subjs
cd $SUBJECTS_DIR

To copy: Highlight the command in the box above, right click and select copy (or use keyboard shortcut Ctrl+c), then use the middle button of your mouse to click inside the terminal window (this will paste the command). Press enter to run the command.

If you would like to follow along for the freeview demo, copy and paste this into the terminal:

freeview -v \
good_output/mri/T1.mgz \
good_output/mri/brainmask.mgz \
good_output/mri/wm.mgz:visible=0 \
-f good_output/surf/lh.white:edgecolor=blue \
good_output/surf/rh.white:edgecolor=blue \
good_output/surf/rh.pial:edgecolor=red \
good_output/surf/lh.pial:edgecolor=red \
good_output/surf/rh.inflated:visible=0 \
good_output/surf/lh.inflated:visible=0 \
-viewport coronal

Take a look at the new features and improvements in Freeview 6!

-  ⇤ ← Revision 1 as of 2014-10-27 11:37:24 → 
  Size: 952
  Editor: AllisonStevens
  Comment:
+   ← Revision 6 as of 2017-09-25 11:52:35 → ⇥
  Size: 1071
  Editor: AllisonStevens
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 7:
-setenv SUBJECTS_DIR $TUTORIAL_DATA/buckner_data/tutorial_subjs
+export SUBJECTS_DIR=$TUTORIAL_DATA/buckner_data/tutorial_subjs
 Line 18:
-good_output/mri/wm.mgz:colormap=heat:opacity=0.4:visible=0 \
+good_output/mri/wm.mgz:visible=0 \
 Line 24:
-good_output/surf/lh.inflated:visible=0
+good_output/surf/lh.inflated:visible=0 \
-viewport coronal
-Line 26:
+Line 27:
+Take a look at the [[FreeviewGuide/FreeviewReference/FreeviewReleaseNotes|new features and improvements]] in Freeview 6!