Back to Group Analysis

Surface-based Cluster Summary Table as created by mri_glmfit-sim.

  1. Lines that begin with '#' are comments
  2. Each data line is a cluster
  3. There are 38 clusters
  4. The value in the first column is the cluster number, which allows linking to the annotation.
  5. Max indicates the maximum -log10(pvalue) in the cluster
  6. VtxMax is the vertex number at the maximum

  7. Size - surface area (mm^2) of cluster
  8. Tal(XYZ) is the talairach (MNI305) coordinate of the maximum
  9. CWP - clusterwise p-value. This is the p-value of the cluster
  10. CWPLow and CWPHi - 90% confidence interval for CWP
  11. NVtxs - number of vertices in cluster

Eg, the 13th cluster has a pvalue of p<.006.

# Cluster Growing Summary (mri_surfcluster)
# $Id: mri_surfcluster.c,v 1.39.2.3 2009/01/15 01:06:01 greve Exp $
# $Id: mrisurf.c,v 1.557.2.17 2009/01/08 17:16:51 nicks Exp $
# CreationTime 2009/01/17-23:15:29-GMT
# cwd /autofs/space/birn_045/users/BWH/buckner_data/tutorial_subjs/group_analysis_tutorial/glm
# sysname  Linux
# hostname crash
# machine  x86_64
# FixVertexAreaFlag 1
# FixSurfClusterArea 1
# 
# Input      lh.gender_age.glmdir.dng/lh-Avg-thickness-age-Cor/sig.mgh
# Frame Number      0
# srcsubj fsaverage
# hemi lh
# surface white
# SUBJECTS_DIR /homes/4/greve/subjects
# Minimum Threshold 4
# Maximum Threshold infinity
# Threshold Sign    neg
# AdjustThreshWhenOneTail 1
# Area Threshold    0 mm^2
# CSD thresh  4.000000
# CSD nreps    1000
# CSD simtype  mc-z
# CSD contrast lh-Avg-thickness-age-Cor
# CSD confint  90.000000
# Overall max 5.48597 at vertex 84216
# Overall min -12.7661 at vertex 10349
# NClusters          38
# Total Cortical Surface Area 65416.6 (mm^2)
# FixMNI = 1
# 
# ClusterNo  Max   VtxMax   Size(mm^2)  TalX   TalY   TalZ    CWP    CWPLow    CWPHi   NVtxs
   1      -12.766   10349   4044.79    -32.9  -30.5   16.2  0.00100  0.00000  0.00200  9674
   2       -9.373   87074   1061.40    -29.3  -65.4   24.8  0.00100  0.00000  0.00200  1827
   3       -9.099   94747   1753.72    -33.2  -16.8   35.9  0.00100  0.00000  0.00200  3826
   4       -8.378  124347    857.47     -8.0    9.5   54.0  0.00100  0.00000  0.00200  1562
   5       -7.655  134038    270.11    -10.0   31.7   26.3  0.00100  0.00000  0.00200   406
   6       -7.207  151199    495.56    -27.2  -46.6   39.8  0.00100  0.00000  0.00200  1428
   7       -7.146  135320    225.86    -44.7  -48.5   10.0  0.00100  0.00000  0.00200   502
   8       -7.054   56027   1620.84    -17.2  -73.7   11.9  0.00100  0.00000  0.00200  2812
   9       -6.792    8949    560.63    -16.3   43.6   32.5  0.00100  0.00000  0.00200  1026
  10       -6.735   96031    362.26    -20.2    8.9   56.5  0.00100  0.00000  0.00200   663
  11       -6.550    8820    285.91    -28.9  -35.3   49.0  0.00100  0.00000  0.00200   628
  12       -6.523  143993    207.58    -28.2  -76.0   -2.8  0.00100  0.00000  0.00200   254
  13       -6.186   50351     94.58     -9.6  -20.1   54.7  0.00600  0.00300  0.00900   218
  14       -6.165  156572    366.23    -42.7  -80.1    4.3  0.00100  0.00000  0.00200   536
  15       -6.149   88337    269.18     -8.4  -43.1   30.0  0.00100  0.00000  0.00200   611
  16       -5.961   12488    241.14    -10.4    8.9   37.4  0.00100  0.00000  0.00200   664
  17       -5.918   63623    150.17    -49.0  -48.8   43.3  0.00100  0.00000  0.00200   351
  18       -5.629   64694     91.13    -17.9  -37.6   47.5  0.00600  0.00300  0.00900   275
  19       -5.599   12705    272.83    -57.0  -34.2   34.0  0.00100  0.00000  0.00200   608
  20       -5.558   43501     86.84    -41.2  -62.0    8.0  0.00800  0.00500  0.01200   178
  21       -5.536  155028     36.06    -27.1   27.0    1.5  0.07700  0.06600  0.08800   110
  22       -5.467  147033    252.12    -57.0  -50.1   19.2  0.00100  0.00000  0.00200   561
  23       -5.452  160783     63.52    -24.7  -11.9  -25.1  0.02900  0.02200  0.03600   176
  24       -5.130  108644    379.76    -18.4  -59.4   59.1  0.00100  0.00000  0.00200   912
  25       -4.751   17102    174.99    -20.2  -65.7   24.3  0.00100  0.00000  0.00200   349
  26       -4.592  106761     74.44    -49.2  -55.3   27.6  0.01500  0.01000  0.02000   152
  27       -4.576   37880     27.15    -38.1   16.0    7.6  0.11600  0.10300  0.12900    73
  28       -4.443   39303     25.56    -16.7  -23.5   35.7  0.12200  0.10900  0.13500    77
  29       -4.347   27994     75.48     -8.6  -42.2   47.1  0.01300  0.00900  0.01800   158
  30       -4.281   45716    117.41    -50.7   28.4    1.1  0.00100  0.00000  0.00200   166
  31       -4.230   89384      0.86    -20.2    6.1  -13.1  0.29700  0.27900  0.31600     2
  32       -4.144   99466     70.11    -47.5  -58.5   40.6  0.02000  0.01400  0.02600   168
  33       -4.124   99664     14.11    -36.2    1.5  -10.2  0.19400  0.17800  0.21000    40
  34       -4.107  162791     22.65     -9.1  -75.8    1.1  0.14000  0.12600  0.15400    26
  35       -4.103  129139      7.53    -47.6  -25.2   -4.4  0.24500  0.22800  0.26200    23
  36       -4.079   92916     32.15     -8.5   -9.8   52.3  0.09000  0.07800  0.10200    62
  37       -3.880   42435     18.70    -18.5  -18.1   66.7  0.16000  0.14500  0.17500    59
  38       -3.775  161351      3.11    -57.6   -6.3  -22.0  0.27900  0.26100  0.29700     6