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[[FsTutorial|Back to list of tutorials]] = Longitudinal Processing - Tutorial = This page will take you through the steps of processing your longitudinal data: * Preparations * Image Processing Steps (cross, base, long) * Checking Results * Post-processing steps * Editing and Rerunning Ater the tutorial (if you want to learn more) you can read details about the longitudinal stream at LongitudinalProcessing and about edits at LongitudinalEdits. == Preparations == If you are taking one of the formally organized courses, everything has been set up for you on the provided laptop. The only thing you will need to do is run the following commands in ''every'' '''new''' terminal window (aka shell) you open throughout this tutorial. Copy and paste the commands below to get started: {{{ setenv SUBJECTS_DIR $TUTORIAL_DATA/long-tutorial cd $SUBJECTS_DIR }}} ''To copy: Highlight the command in the box above, right click and select copy (or use keyboard shortcut Ctrl+c), then use the middle button of your mouse to click inside the terminal window (this will paste the command). Press enter to run the command.'' These two commands set the SUBJECTS_DIR variable to the directory where the data is stored and then navigates into this directory. If you are '''NOT''' taking one of the formally organized courses, klick [[FsTutorial/LongPrep|here]]. |
Longitudinal Processing - Tutorial
This page will take you through the steps of processing your longitudinal data:
- Preparations
- Image Processing Steps (cross, base, long)
- Checking Results
- Post-processing steps
- Editing and Rerunning
Ater the tutorial (if you want to learn more) you can read details about the longitudinal stream at LongitudinalProcessing and about edits at LongitudinalEdits.
Preparations
If you are taking one of the formally organized courses, everything has been set up for you on the provided laptop. The only thing you will need to do is run the following commands in every new terminal window (aka shell) you open throughout this tutorial. Copy and paste the commands below to get started:
setenv SUBJECTS_DIR $TUTORIAL_DATA/long-tutorial cd $SUBJECTS_DIR
To copy: Highlight the command in the box above, right click and select copy (or use keyboard shortcut Ctrl+c), then use the middle button of your mouse to click inside the terminal window (this will paste the command). Press enter to run the command.
These two commands set the SUBJECTS_DIR variable to the directory where the data is stored and then navigates into this directory.
If you are NOT taking one of the formally organized courses, klick here.