Running recon-all on data collected at 7T
See also: SubmillimeterRecon
Compared to 3T MPRAGE and MEMPRAGE scans collected at 7T have stronger intensity inhomogenity, which won't be fully corrected in the default recon-all. Therefore, to process 7T data we recommend the following steps:
1) Bias-correct your input images using SPM12's unified segmentation algorithm (Ashburner and Friston, 2005)
2) Run recon-all as usuall with bias-corrected image as input
Recommended bias-correction parameters: