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There are three main internal distributions of FreeSurfer available at the NMR Center. To use a distribution, set your FREESURFER_HOME environment variable to the directory of the distribution and then source the FreeSurferEnv.csh file in that distribution. For example: There are three main internal distributions of FreeSurfer available at the NMR Center. To use a distribution, set your FREESURFER_HOME environment variable to the directory of the distribution and then source the Free``Surfer``Env.csh file in that distribution. For example:

There are three main internal distributions of FreeSurfer available at the NMR Center. To use a distribution, set your FREESURFER_HOME environment variable to the directory of the distribution and then source the FreeSurferEnv.csh file in that distribution. For example:

setenv FREESURFRER_HOME ~inverse/freesurfer_alpha
source $FREESURFER_HOME/FreeSurferEnv.csh

Note that you may still have to set up your path. Be sure you are using the right binaries with the which command.

See

InternalFreeSurferDistributions (last edited 2022-03-28 13:47:57 by AndrewHoopes)