Results 1 - 25 of 28 results out of about 3675 pages. (5.28 seconds)

Publications . . . 131 matches
...ntation and Surface Reconstruction]], Dale, A.M., Fischl, B., Sereno, M.I., (1999). !NeuroImage 9(2):179-194 * [[https://surfer.nmr.mgh.harvard.edu/ftp/articles/fischl99b-recon2.p...

87.3k - rev: 340 (current) last modified: 2021-05-03 08:49:05

SubregionSegmentation . . . 9 matches
... Van Leemput, K., Greve, D., van der Kouwe, A., Caballero-Gaudes, C., Paz-Alonso, P. Neuroimage (accepted). * Hippocampus: [[http://www.nmr.mgh.harvard.edu/~iglesias/pdf/subfield...

7.4k - rev: 10 (current) last modified: 2023-11-20 13:23:42

LongitudinalProcessing . . . 8 matches
...Registration: A Robust Approach,'''''<<BR>> M. Reuter, H.D. Rosas, B. Fischl.<<BR>> !NeuroImage 53(4), pp. 1181-1196, 2010. http://dx.doi.org/10.1016/j.neuroimage.2010.07.020 <<B...

19.3k - rev: 74 (current) last modified: 2021-05-03 07:53:08

FreeSurferAnalysisPipelineOverview . . . 6 matches
..., M.I., Cortical Surface-Based Analysis I: Segmentation and Surface Reconstruction. NeuroImage 9(2):179-194. 1999. * Fischl, B.R., Sereno, M.I., Dale, A. M. Cortical Surface-Base...

13.9k - rev: 23 (current) last modified: 2017-04-14 16:06:28

sbTIV . . . 4 matches
...tion against manual measurement of total intracranial volume]] Buckner et al. (2004) NeuroImage 23:724-738. However, etiv is not obtained via direct segmentation of all structures...

7.4k - rev: 72 (current) last modified: 2023-01-05 11:00:54

LongitudinalProcessing45 . . . 4 matches
...nverse Consistent Registration: A Robust Approach, M. Reuter, H.D. Rosas, B. Fischl. NeuroImage 53 (4), pp. 1181-1196, 2010. http://dx.doi.org/10.1016/j.neuroimage.2010.07.020 <<...

14.8k - rev: 7 (current) last modified: 2011-04-18 13:09:05

infantFS . . . 3 matches
... surface extraction pipeline for T1-weighted neuroimaging data of infants 0-2 years, NeuroImage, 2020, 116946, https://doi.org/10.1016/j.neuroimage.2020.116946. (http://www.science...

8.8k - rev: 31 (current) last modified: 2022-12-05 12:13:59

ScLimbic . . . 3 matches
...opes, A, Hoffmann, M, Dalca, A, Fischl, B, Iglesias, JE, Augustinack, JC. Accepted. Neuroimage 2021. 10.1016/j.neuroimage.2021.118610. PMID: 34571161.]] https://pubmed.ncbi.nlm.ni...

9.7k - rev: 58 (current) last modified: 2021-12-14 17:35:35

Samseg . . . 3 matches
...tion using parametric Bayesian modeling]]. O. Puonti, J.E. Iglesias, K. Van Leemput. NeuroImage, 143, 235-249, 2016. * MS lesions: [[http://nmr.mgh.harvard.edu/~koen/CerriNI2021....

14.1k - rev: 121 (current) last modified: 2023-03-20 17:46:12

BrainstemSubstructures . . . 3 matches
...s in your analysis, please cite: * [[http://www.nmr.mgh.harvard.edu/~iglesias/pdf/Neuroimage_2015_brainstem.pdf|Bayesian segmentation of brainstem structures in MRI]]. Iglesias,...

9.6k - rev: 48 (current) last modified: 2023-11-20 13:18:20

recon-all . . . 2 matches
...(1999). Cortical Surface-Based Analysis I: Segmentation and Surface Reconstruction. NeuroImage 9(2):179-194 [3] Fischl, B.R., Sereno, M.I.,Dale, A. M. (1999) Cortical Surface-Ba...

34.9k - rev: 47 (current) last modified: 2017-12-08 18:23:09

ThalamicNucleiDTI . . . 2 matches
...f you use these tools in your analysis, please cite: * [[https://doi.org/10.1016/j.neuroimage.2023.120129|Accurate Bayesian segmentation of thalamic nuclei using diffusion MRI an...

9.5k - rev: 24 (current) last modified: 2023-10-19 07:54:37

Orientation . . . 2 matches
...I fluctuation amplitudes on cerebral cortical orientation relative to the direction of B0 and anatomical axes''. NeuroImage 2019; 196:337--350; DOI:10.1016/j.neuroimage.2019.04.036...

2.6k - rev: 2 (current) last modified: 2021-01-04 11:56:57

GradUnwarp . . . 2 matches
...MRI Studies: Effects of Gradient Non-linearity Correction on Phantom and Human Data. NeuroImage NeuroImage (Apr 1;30(2):436-43, 2006) Outline of steps involved: 1. Obtain from...

8.5k - rev: 23 (current) last modified: 2015-01-22 12:59:17

BrodmannAreaMaps . . . 2 matches
...G. Wiggins, L.L. Wald, H.D. Rosas, A. Potthast, E.L. Schwartz and B. Fischl (2007). NeuroImage 2007.10.033. * Quantitative analysis of cyto- and receptor architecture of the huma...

3.9k - rev: 28 (current) last modified: 2015-05-13 11:30:14

mri_normalize . . . 1 match
...egmentation and Surface Reconstruction", Dale, A.M., Fischl, B., Sereno, M.I. (1999) NeuroImage 9(2):179-194 = Reporting Bugs = Report bugs to <analysis-bugs@nmr.mgh.harvard.edu> ...

3.6k - rev: 9 (current) last modified: 2018-01-03 17:31:02

mri_cvs_register . . . 1 match
...Improved Tractography Alignment Using Combined Volumetric and Surface Registration", NeuroImage 51 (2010), 206-213 = Reporting Bugs = Report bugs to < analysis-bugs@nmr.mgh.harvar...

12.2k - rev: 20 (current) last modified: 2018-02-05 12:34:44

mri_concat . . . 1 match
... -2.1 and +3.4 --> -2.1 = Reference = Nichols, Brett, Andersson, Wager, and Poline NeuroImage, Volume 25, Issue 3, 15 April 2005, 653-660 = Reporting Bugs = Report bugs to frees...

3.8k - rev: 9 (current) last modified: 2017-11-22 18:41:12

eTIV . . . 1 match
...tion against manual measurement of total intracranial volume]] Buckner et al. (2004) NeuroImage 23:724-738. Basically, total intracranial volume is found to correlate with the det...

10.7k - rev: 49 (current) last modified: 2021-02-05 14:24:45

V1 . . . 1 match
...G. Wiggins, L.L. Wald, H.D. Rosas, A. Potthast, E.L. Schwartz and B. Fischl (2008). NeuroImage 39:1585-1599. To create these label: {{{ recon-all -s subjid -label-v1 }}} This wi...

0.9k - rev: 17 (current) last modified: 2021-09-22 11:41:59

SurfaceLabelAtlas . . . 1 match
...uckner, A.M. Dale, R.P. Maguire, B.T. Hyman, M.S. Albert, and R.J. Killiany, (2006). NeuroImage 31(3):968-80. See: ArticlesSlidesAndPosters = Document Author(s) = Graham Wideman ...

4.4k - rev: 16 (current) last modified: 2021-05-03 08:56:36

FsTutorial/VisualizingAndPlotting . . . 1 match
...in Functional Neuroimaging Using the False Discovery Rate. Genovese, Lazar, Nichols. NeuroImage 15:870-878, 2002. FDR is built directly into the tksurfer interface. To use it, cho...

5.3k - rev: 17 (current) last modified: 2021-09-22 11:41:23

FsTutorial/Visualization . . . 1 match
...in Functional Neuroimaging Using the False Discovery Rate. Genovese, Lazar, Nichols. NeuroImage 15:870-878, 2002. FDR is built directly into the tksurfer interface. To use it, cho...

9.2k - rev: 27 (current) last modified: 2021-09-22 11:40:33

FsTutorial/GcaFormat . . . 1 match
..., Salat, D.H., van der Kouwe, A.J.W., Makris, N., Ségonne, F., and Dale, A.M. (2004) NeuroImage 23:S69-S84. * [[https://surfer.nmr.mgh.harvard.edu/ftp/articles/AtlasSeg_TMI2007Apr...

2.0k - rev: 7 (current) last modified: 2012-04-18 14:20:10

CrossSequence . . . 1 match
...ucture registration, as a resort to improve the robustness of the registration method. The 1997 NeuroImage paper by Ashburner et al is a good reference for such type of approaches....

8.5k - rev: 13 (current) last modified: 2008-04-29 11:46:17

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