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A number of ROIs created by the [[http://brainvis.wustl.edu|Van Essen Lab]] using the [[http://brainvis.wustl.edu/wiki/index.php/Caret:Atlases|PALS-B12 atlas of human cerebral cortex]] have been mapped to !FreeSurfer's fsaverage subject, taking the form of !FreeSurfer annotation files. One or more of these ROIs can be mapped to a subject (using mri_annotation2label and mri_label2label, then mri_anatomical_stats to get stats). A number of ROIs created by the [[http://brainvis.wustl.edu|Van Essen Lab]] using the [[http://brainvis.wustl.edu/wiki/index.php/Caret:Atlases|PALS-B12 atlas of human cerebral cortex]] have been mapped to !FreeSurfer's fsaverage subject included with v5.0.0, taking the form of !FreeSurfer annotation files. One or more of these ROIs can be mapped to a subject (using mri_annotation2label and mri_label2label, then mri_anatomical_stats to get stats).

PALS-B12 ROIs on fsaverage

A number of ROIs created by the Van Essen Lab using the PALS-B12 atlas of human cerebral cortex have been mapped to FreeSurfer's fsaverage subject included with v5.0.0, taking the form of FreeSurfer annotation files. One or more of these ROIs can be mapped to a subject (using mri_annotation2label and mri_label2label, then mri_anatomical_stats to get stats).

Provenance and reference information about the ROIs originating from Caret can be viewed by:

mris_info lh.PALS_B12.labels.gii

The ROI .annot files are found in the fsaverage/label directory, and are displayed below on the fsaverage inflated surface:

?h.PALS_B12_Brodmann.annot

lh.palsbrodmannlat.jpg lh.palsbrodmannmed.jpg


?h.PALS_B12_Lobes.annot

lh.palslobeslat.jpg lh.palslobesmed.jpg


?h.PALS_B12_OrbitoFrontal.annot

lh.palsorbitofrontal.jpg


?h.PALS_B12_Visuotopic.annot

lh.palsvisuotopic.jpg

PALS_B12 (last edited 2021-09-22 09:57:07 by DevaniCordero)