recon-all -s bert -all runtime comparison

v3.0.5 run on AMD Opteron 64bit 2.5GHz processor

v4.0.1 run on Intel Xeon 3.0GHz processor

stage

v3.0.5

v4.0.1

-motioncor

< 5 min

10 min

-nuintensitycor

3 min

1 min

-talairach

1 min

2 min

-normalization

5 min

5 min

-skullstrip

2 min

30 min

-gcareg

8 min

16 min

-canorm

1 min

3 min

-careg

10 hours

11 hours

-rmneck

3 min

3 min

-skull-lta

9 min

22 min

-calabel

30 min

8 hours

-normalization2

3 min

6 min

-segmentation

4 min

4 min

-fill

1 min

2 min

per hemisphere:

-tessellate

< 1 min

2 min

-smooth1

< 1 min

< 1 min

-inflate1

1 min

2 min

-qsphere

16 min

22 min

-fix

1-2 hours

1 hour

-finalsurfs

1-2 hours

2 hours

-smooth2

< 1 min

1 min

-inflate2

2 min

2 min

-cortribbon

< 1 min

3 min

-sphere

1-2 hours

2-4 hours

-surfreg

1 hour

5 hours

-contrasurfreg

1 hour

-

-avgcurv

< 1 min

1 min

-cortparc

1 min

1 min

-parcstats

< 1 min

1 min

-cortparc2

1 min

1 min

-parcstats2

< 1 min

1 min

-volmask

30 min

-aparc2aseg

1 min

12 min

-wmparc

1 hour

-all

26 hours

48 hours