Please use this page to contribute your own scripts. Use the existing format on this page to create a link to a new page, then insert your script in the new page. Please keep your entry on this page short and descriptive, and use the new page to go more in depth. For more instructions, check the comments that are visible when you edit this page.
Edit the wiki page of the script you want before copying so line breaks are preserved.
Scripts
- scuba - [wiki:/One Read data and make snapshots] - Here is a sample script that loads up different surface files and saves screen captures.
- recon-all - [wiki:/Two Multiple recon-all] - Here some command to recon-all multiple subjects.
- roi - [wiki:/kslays/roi Create a functional ROI spreadsheet] - This script will take a list of ROI labels created for one subject, copy it to many subjects (mrilabel2label), create thresholded ROIs from functional activation (func2roi-sess), and output text summaries for excel or spss (roisummary-sess). You can do this for a list of analyses and contrasts.