Results 1 - 25 of 32 results out of about 3234 pages. (7.73 seconds)

freesurferstats2table . . . 9 matches
...The following scripts can be used to control asegstats2table and aparcstats2table commands in order to generate text/ascii tables of freesurfer stats data for all subjects in the ...

1.2k - rev: 47 (current) last modified: 2012-02-17 14:19:25

aparcstats2table . . . 4 matches
...= aparcstats2table = == Introduction == This script will generate text/ascii tables of freesurfer parcellation stats data, ?h.aparc.stats. This can then be easily imported into a ...

4.4k - rev: 9 (current) last modified: 2021-09-11 14:37:37

asegstats2table . . . 3 matches
...= asegstats2table = == Introduction == This script will generate text/ascii tables of freesurfer aseg stats data, aseg.stats. This can then be easily imported into a spreadsheet...

3.5k - rev: 9 (current) last modified: 2012-12-03 11:36:04

PreviousReleaseNotes . . . 24 matches
...where it created labels with spaces in the name, which causes table parsing in aparcstats2table to fail. * fixed aparcstats2table, asegstats2table where output of the parcellati...

94.0k - rev: 4 (current) last modified: 2019-08-21 12:41:42

CourseTestCommands . . . 12 matches
...RIAL_DATA/buckner_data/tutorial_subjs/group_analysis_tutorial cd $SUBJECTS_DIR asegstats2table --subjects 004 021 040 067 080 092 \ --segno 11 17 18 \ --tablefile aseg.vol.ta...

28.9k - rev: 9 (current) last modified: 2013-04-25 10:33:20

FsTutorial/AnatomicalROIV6.0 . . . 11 matches
... table of segmentation volumes using the 6 subjects mentioned above. '' '' {{{ asegstats2table --subjects 004 021 040 067 080 092 \ --segno 11 17 18 \ --tablefile aseg.vol.ta...

28.8k - rev: 33 (current) last modified: 2019-09-20 17:53:14

FsTutorial/AnatomicalROI . . . 9 matches
... table of segmentation volumes using the 6 subjects mentioned above. '' '' {{{ asegstats2table --subjects 004 021 040 067 080 092 \ --segno 11 17 18 \ --tablefile aseg.vol.ta...

22.8k - rev: 64 (current) last modified: 2021-01-19 18:44:05

DraftChallenges . . . 7 matches
...Beginner ''' Goal: ''' To practice collecting different types of measures with asegstats2table Create a table called mean.practice.table that lists the average mean intensities ...

15.6k - rev: 38 (current) last modified: 2019-10-28 13:17:59

FsTutorial/TraculaStatistics . . . 6 matches
...pecifically, the text files can be converted into a table using the command {{{tractstats2table}}} and then used for doing GLM analyses with [[mri_glmfit]] or any other statistica...

22.1k - rev: 116 (current) last modified: 2022-01-20 13:21:34

FsTutorial/AnatomicalROI_tktools . . . 6 matches
...a table of segmentation volumes using the 6 subjects mentioned above. ---- {{{ asegstats2table --subjects 004 021 040 067 080 092 \ --segno 11 17 18 \ --tablefile aseg.vol.ta...

20.0k - rev: 97 (current) last modified: 2013-11-01 14:32:41

WikiToDo . . . 4 matches
...== * create page to list stuff to put on wiki page (done! way to go Jenni!) * asegstats2table aparcstats2table ([[http://surfer.nmr.mgh.harvard.edu/fswiki/asegstats2table|done]]...

1.0k - rev: 9 (current) last modified: 2008-04-29 11:45:40

MultiModalTutorialV6.0/FMRIGroupAnalysis . . . 4 matches
...-Hippocampus || == Measure Volume of Positive Activation in Each ROI == {{{ asegstats2table \ --meas volume \ --tablefile ces.pos-masked.vol.stats \ --i fbirn-101/ces.po...

11.8k - rev: 26 (current) last modified: 2019-03-26 10:26:51

LongitudinalStatistics . . . 4 matches
...rab the data from all subjects and time points and create a single table are {{{asegstats2table}}} and {{{aparcstats2table}}}. For example to create a table with subcoritical ROI...

11.1k - rev: 46 (current) last modified: 2018-07-25 12:06:32

FsTutorial/VolumetricGroupAnalysis . . . 4 matches
... into one table that will be easily read into a spreadsheet program, by using [[asegstats2table]]. You can do this for the tutorial set of subjects with this sample command line:...

12.6k - rev: 3 (current) last modified: 2011-03-30 16:17:50

FsTutorial/QdecGroupAnalysisV6.0 . . . 4 matches
...erate Stats Data Tables''' button. This will run the !FreeSurfer utilities {{{asegstats2table}}} and {{{aparcstats2table}}} on your group data. Upon completion (you should see...

28.6k - rev: 29 (current) last modified: 2019-03-26 10:19:20

LinearMixedEffectsModels . . . 3 matches
..., time, and demographics. For the '''univariate approach''', using the tools {{{asegstats2table}}} and {{{aparcstats2table}}}, you can directly grab the stats values from the long...

23.7k - rev: 68 (current) last modified: 2018-07-25 12:13:05

FsTutorial/QuestionAnswers . . . 3 matches
...ice on this would be appreciated! Thanks!''' Answer: When you run the commands asegstats2table or aparcstats2table, it will put the stats files in a text friendly format that can...

45.5k - rev: 81 (current) last modified: 2018-10-04 16:22:01

FsTutorial/QdecGroupAnalysis_tktools . . . 3 matches
...Generate Stats Data Tables'''' button. This will run the !FreeSurfer utilities asegstats2table and aparcstats2table on your group data. Upon completion (you should see the progr...

26.1k - rev: 174 (current) last modified: 2013-11-01 14:30:07

FsTutorial/QdecGroupAnalysis_freeview . . . 3 matches
...Generate Stats Data Tables'''' button. This will run the !FreeSurfer utilities asegstats2table and aparcstats2table on your group data. Upon completion (you should see the progr...

25.8k - rev: 77 (current) last modified: 2017-08-31 05:05:15

FsTutorial/MultiModalFmriGroup_tktools . . . 3 matches
...-Hippocampus == Measure Volume of Positive Activation in Each ROI == ---- {{{ asegstats2table \ --meas volume \ --tablefile ces.pos-masked.vol.stats \ --i fbirn-101/ces.po...

10.4k - rev: 29 (current) last modified: 2014-01-28 16:48:27

FsTutorial/MultiModalFmriGroup_freeview . . . 3 matches
...-Hippocampus || == Measure Volume of Positive Activation in Each ROI == {{{ asegstats2table \ --meas volume \ --tablefile ces.pos-masked.vol.stats \ --i fbirn-101/ces.po...

11.8k - rev: 44 (current) last modified: 2017-03-23 14:26:42

mri_glmfit . . . 2 matches
... table as input instead of --y. The stats-table is that of the form produced by asegstats2table or aparcstats2table. --fsgd fname <gd2mtx> Specify the global design matrix with ...

18.3k - rev: 11 (current) last modified: 2020-11-11 12:30:18

mri_convert . . . 2 matches
...ttle endian || ||--in_stats_table || Input data is a stats table as produced by asegstats2table or aparcstats2table || ||--out_stats_table || Output data is a stats table (use --l...

12.7k - rev: 47 (current) last modified: 2017-11-29 12:05:15

UserContributions/Scripts . . . 2 matches
...stribution of values in your MRI volume. Requires running from matlab. * freesurferstats2table - [[http://surfer.nmr.mgh.harvard.edu/fswiki/freesurferstats2table|Export Values fr...

3.0k - rev: 22 (current) last modified: 2011-07-11 12:37:22

ThalamicNuclei . . . 2 matches
...ic-nuclei.rh.v12.T1.stats. Group data can be aggregated with something like {{{ asegstats2table --statsfile=thalamic-nuclei.lh.v12.T1.stats --tablefile=thalamic-nuclei.lh.v12.T1.d...

17.3k - rev: 29 (current) last modified: 2022-07-28 10:18:19

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