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== Positional Arguments == None |
||-roi roiconfig || || ||-force || Delete any existing roiconfig files || == Define the anatomical label == ||-label labelname || || ||-annot annotname labelname || (hemi.annotname.annot) || ||-seg segvol segid || || ||-fillthresh fillthresh || || |
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== Required Flagged Arguments == == Optional Flagged Arguments == = Outputs = |
== Define the functional constraint == ||-analysis analysisname || Name of analysis configuration || ||-contrast contrastname || || ||-thresh threshhold || || ||-sign sign || abs, pos, neg || ||-map map || Default is sig || ||-frame frameno || Frame within contrast sig (default is 0) || |
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| Configures a region-of-interest (ROI) based on subject-specific anatomical and, possibly, functional definitions. This does not perform the analysis; it only configures the parameters needed to define the ROI for later analysis with funcroi-sess and/or funcroi-table-sess. The output is a simple text file (the configuration). |
Index
Contents
Name
funcroi-config
Synopsis
Arguments
-roi roiconfig |
|
-force |
Delete any existing roiconfig files |
Define the anatomical label
-label labelname |
|
-annot annotname labelname |
(hemi.annotname.annot) |
-seg segvol segid |
|
-fillthresh fillthresh |
|
Define the functional constraint
-analysis analysisname |
Name of analysis configuration |
-contrast contrastname |
|
-thresh threshhold |
|
-sign sign |
abs, pos, neg |
-map map |
Default is sig |
-frame frameno |
Frame within contrast sig (default is 0) |
Description
Configures a region-of-interest (ROI) based on subject-specific anatomical and, possibly, functional definitions. This does not perform the analysis; it only configures the parameters needed to define the ROI for later analysis with funcroi-sess and/or funcroi-table-sess. The output is a simple text file (the configuration).
Examples
Example 1
Bugs
None
See Also
Links
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>