Name

mkxsubjreg- Creates new registration matrix

Synopsis

mkxsubjreg --srcreg BR mkxsubjreg --tarreg

Arguments

Positional Arguments

None

Required Flagged Arguments

--srcreg

--tarreg

Optional Flagged Arguments

--targsubj subjid : default is talairach BR --xfm xfmrname : xfm file name relative to transforms BR --sd subjects_dir : default is env SUBJECTS_DIR BR --fvol funcvol : path to example functional volume BR --help BR --version BR

Outputs

srcreg.dat

targreg.dat

Description

Creates new registration matrix that maps from the functional volume of the source subject to the orig of the target subject through the talairach transform.

Examples

Example 2

Bugs

Links

FreeSurfer, FsFast

Methods Description

References

Reporting Bugs

Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

-  ⇤ ← Revision 2 as of 2004-09-01 16:04:21 → 
  Size: 2173
  Editor: JulieBates
  Comment:
+   ← Revision 5 as of 2004-09-01 16:24:54 → ⇥
  Size: 1398
  Editor: JulieBates
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 14:
-mkxsubjreg- Creates new matrix
+mkxsubjreg- Creates new registration matrix
 Line 17:
-mkxsubjreg --srcreg
+mkxsubjreg --srcreg [[BR]]
 Line 20:
-command argA argB -flag1 arg1 -flag2 arg2 [-flag3 arg3] [-flag4 arg4]
-Line 26:
+Line 25:
-|| argA || brief description || detailed description (eg, help file information)  ||
|| argB || brief description || detailed description (eg, help file information)  ||
-Line 31:
+Line 29:
-|| --targsubj subjid || default is talairach
|| --xfm xfmrname || xfm file name relative to transforms
|| --sd subjects_dir ||  default is env SUBJECTS_DIR
|| --fvol funcvol ||  path to example functional volume
|| --help
|| --version
+|| --srcreg ||
|| --tarreg ||
-Line 38:
+Line 32:
-|| -flag1 arg1 || brief description || detailed description (eg, help file information) ||
|| -flag2 arg2 || brief description || detailed description (eg, help file information) ||
-Line 42:
+Line 34:
-|| -flag3 arg3 || brief description ||detailed description (eg, help file information) ||
|| -flag4 arg4 || brief description ||detailed description (eg, help file information) ||
+ --targsubj subjid :  default is talairach [[BR]]
 --xfm xfmrname : xfm file name relative to transforms [[BR]]
 --sd subjects_dir :  default is env SUBJECTS_DIR [[BR]]
 --fvol funcvol : path to example functional volume [[BR]]
 --help [[BR]]
 --version [[BR]]
 Line 50:
-|| volume1 || description ||
|| volume2 || description ||
 Line 59:
-== Example 1 ==
command foo -i f -o out
-Line 62:
+Line 60:
-description
-Line 65:
+Line 64:
-command foo -i f -o out -f fvalue
-Line 67:
+Line 65:
-description
-Line 70:
+Line 69:
-None
-Line 73:
+Line 72:
-["othercommand1"], ["othercommand2"]
-Line 79:
+Line 78:
-{{{
description
description
}}}
-Line 85:
+Line 84:
-["References/Lastname###"]
-Line 91:
+Line 90:
-JaneSmith