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Comment: set up command template, brief summary of command
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= mri_convert =

mri_convert - converts MRI data from any of a number of native formats to the specified format (usually COR) required for FreeSurfer processing

= Synopsis =
 command argA argB -flag1 <arg1> -flag2 <arg2> -flag3 <arg3>

= Positional Arguments =
 argA

 Description

 argB

 Description

= Required Flagged Arguments =
 -flag1 <arg1>

 Description

 - flag2 <arg2>

 Description

= Optional Flagged Arguments =

 -flag3 <arg3>

 Description.

= Outputs =
 file1

 Description

 file2

 Description

= Example 1 =
 command argA argB -flag1 foo -flag2 goo

 Description

= Example 2 =
 command argA argB -flag1 foo -flag2 goo -flag3 hoo

 Description

= See Also =
 ["command2"]

 ["command3"]

= Author =
 JaneSmith

= Links =
 Command``Guide

= References =
## For example: ["Belliveau1991"]
 NameYear

= Reporting Bugs =
 Report bugs to <>

= Category =
## For example: CategoryFreeSurferCommandVolumeConversion
 Category``Stream``Command
#refresh 3 https://surfer.nmr.mgh.harvard.edu/pub/docs/html/mri_convert.help.xml.html

mri_convert (last edited 2017-11-29 12:05:15 by MorganFogarty)