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mri_em_register <in brain volume> <template gca> <output transform name>mri mri_em_register <in brain volume> <template gca> <output transform name>
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== Positional Arguments ==
|| <in brain volume> || input volume ||
|| <template gca> || template gca ||
|| <output transform name> || output transform ||
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== Optional Flagged Arguments ==
|| -mask volname ||use volname as a mask ||
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= Outputs =
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  = Outputs =
|| tranform || transform in lta format ||
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== Example 2 ==
mri_em_register -mask subject1/mri/brain subject1/mri/nu single_one.gca subject1/mri/transforms/talairach_one.lta
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none known

Index TableOfContents

Name

mri_em_register

Synopsis

mri_em_register <in brain volume> <template gca> <output transform name>

Arguments

Positional Arguments

<in brain volume>

input volume

<template gca>

template gca

<output transform name>

output transform

Optional Flagged Arguments

-mask volname

use volname as a mask

Outputs

tranform

transform in lta format

Description

Examples

Example 1

mri_em_register -mask subject1/mri/brain subject1/mri/nu single_one.gca subject1/mri/transforms/talairach_one.lta

Bugs

none known

See Also

Links

FreeSurfer, FsFast

Methods Description

References

["References/Lastname###"]

Reporting Bugs

Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

Author/s

mri_em_register (last edited 2018-01-26 14:40:26 by RicardoValle)