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| ## See HelpOnCommandTemplate for description of formatting ## ## Note: If you are modifying this page please refer to the ## CommandTemplate page and confirm that this page has the latest ## CommandTemplate formatting <<Navigation(children)>> '''Index''' <<TableOfContents>> |
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mri_motion_correct - averages a number of volumes and corrects for motion |
mri_motion_correct - averages a number of volumes and performs MotionCorrection |
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| command argA argB -flag1 <arg1> -flag2 <arg2> -flag3 <arg3> | mri_motion_correct outvol invol1 invol2 [<options>] |
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| = Positional Arguments = argA |
= Arguments = == Positional Arguments == || outvol || description || || invol1 || description || || invol2 || description || |
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| Description | |
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| argB | == Required Flagged Arguments == None |
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| Description = Required Flagged Arguments = -flag1 <arg1> Description - flag2 <arg2> Description = Optional Flagged Arguments = -flag3 <arg3> Description. |
== Optional Flagged Arguments == ||-?? [??] || description || |
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| file1 | || orig || averaged and motion corrected volume || |
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| Description | = Description = description |
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| file2 | = Examples = == Example 1 == mri_motion_correct ../orig 002 003 |
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| Description | description |
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| = Example 1 = command argA argB -flag1 foo -flag2 goo Description = Example 2 = command argA argB -flag1 foo -flag2 goo -flag3 hoo Description |
= Bugs = None |
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| ["command2"] ["command3"] = Author = JaneSmith |
[[othercommand1]], [[othercommand2]] |
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| Command``Guide | FreeSurfer = Methods Description = {{{ ?? }}} |
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| ## For example: ["Belliveau1991"] NameYear |
[[References/Lastname###]] |
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| Report bugs to <> | Report bugs to <analysis-bugs@nmr.mgh.harvard.edu> |
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| = Category = ## For example: CategoryFreeSurferCommandVolumeConversion Category``Stream``Command |
= Author/s = BruceFischl |
Index
Contents
Name
mri_motion_correct - averages a number of volumes and performs MotionCorrection
Synopsis
mri_motion_correct outvol invol1 invol2 [<options>]
Arguments
Positional Arguments
outvol |
description |
invol1 |
description |
invol2 |
description |
Required Flagged Arguments
None
Optional Flagged Arguments
-?? [??] |
description |
Outputs
orig |
averaged and motion corrected volume |
Description
description
Examples
Example 1
mri_motion_correct ../orig 002 003
description
Bugs
None
See Also
Links
Methods Description
??
References
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>