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| ## See HelpOnCommandTemplate for description of formatting ## ## Note: If you are modifying this page please refer to the ## CommandTemplate page and confirm that this page has the latest ## CommandTemplate formatting |
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mri_motion_correct - averages a number of volumes and corrects for motion |
mri_motion_correct - averages a number of volumes and performs MotionCorrection |
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| command argA argB -flag1 <arg1> -flag2 <arg2> -flag3 <arg3> | mri_motion_correct [outfile] [infile1] [infile2] [<options>] |
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| argA | || [outfile] || description || || [infile1] || description || || [infile2] || description || |
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| Description argB Description |
|
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| -flag1 <arg1> Description - flag2 <arg2> Description |
None |
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-flag3 <arg3> Description. |
||-?? [??] || description || |
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| file1 | || orig || averaged and motion corrected volume || |
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| Description file2 Description |
= Description = description |
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| command argA argB -flag1 foo -flag2 goo | mri_motion_correct ../orig 002 003 |
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| Description = Example 2 = command argA argB -flag1 foo -flag2 goo -flag3 hoo Description |
description |
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| ["command2"] ["command3"] = Author = JaneSmith |
["othercommand1"], ["othercommand2"] |
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| Command``Guide | FreeSurfer = Methods Description = {{{ description description }}} |
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| ## For example: ["Belliveau1991"] NameYear |
["References/Lastname###"] |
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| Report bugs to <> | Report bugs to <analysis-bugs@nmr.mgh.harvard.edu> |
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| = Category = ## For example: CategoryFreeSurferCommandVolumeConversion Category``Stream``Command |
= Author/s = BruceFischl |
Name
mri_motion_correct - averages a number of volumes and performs MotionCorrection
Synopsis
mri_motion_correct [outfile] [infile1] [infile2] [<options>]
Positional Arguments
[outfile] |
description |
[infile1] |
description |
[infile2] |
description |
Required Flagged Arguments
None
Optional Flagged Arguments
-?? [??] |
description |
Outputs
orig |
averaged and motion corrected volume |
Description
description
Example 1
mri_motion_correct ../orig 002 003
description
See Also
["othercommand1"], ["othercommand2"]
Links
Methods Description
description description
References
["References/Lastname###"]
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>