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mri_motion_correct arg1 -i <arg2> -o <arg3> [<options>] | mri_motion_correct [outfile] [infile1] [infile2] [<options>] |
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arg1 | [outfile] |
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[infile1] description [infile2] |
|
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-i <arg2> description description -o <arg3> description description |
None |
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-f <fvalue> description description -g <gvalue> |
-?? [??] |
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volume1 - description volume2 - description |
orig - averaged and motion corrected volume |
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mri_motion_correct foo -i f -o out }}} = Example 2 = {{{ mri_motion_correct foo -i f -o out -f fvalue |
mri_motion_correct ../orig 002 003 |
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["othercommand1"] ["othercommand2"] |
["minctrac"] |
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FreeSurfer | FreeSurfer, FsFast |
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= Methods Description = {{{ mri_motion_correct is a minctracc wrapper for averaging ["COR"] volumes }}} |
Name
mri_motion_correct - averages a number of volumes and corrects for motion
Synopsis
mri_motion_correct [outfile] [infile1] [infile2] [<options>]
Positional Arguments
[outfile] description [infile1] description [infile2] description
Required Flagged Arguments
None
Optional Flagged Arguments
-?? [??] description description
Outputs
orig - averaged and motion corrected volume
Example 1
mri_motion_correct ../orig 002 003
See Also
- ["minctrac"]
Author
Links
References
- ["References/NameYear"]
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>
Methods Description
mri_motion_correct is a minctracc wrapper for averaging ["COR"] volumes