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| ## see dtrecon as an exmaple | ## See HelpOnCommandTemplate for description of formatting ## ## Note: If you are modifying this page please refer to the ## CommandTemplate page and confirm that this page has the latest ## CommandTemplate formatting <<Navigation(children)>> '''Index''' <<TableOfContents>> |
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| mri_motion_correct - averages a number of volumes and performs MotionCorrection = Synopsis = mri_motion_correct outvol invol1 invol2 [<options>] = Arguments = == Positional Arguments == || outvol || description || || invol1 || description || || invol2 || description || == Required Flagged Arguments == None == Optional Flagged Arguments == ||-?? [??] || description || = Outputs = || orig || averaged and motion corrected volume || = Description = description = Examples = == Example 1 == mri_motion_correct ../orig 002 003 description = Bugs = None = See Also = [[othercommand1]], [[othercommand2]] = Links = FreeSurfer = Methods Description = |
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| mri_motion_correct - averages a number of volumes and corrects for motion }}} = Synopsis = {{{ mri_motion_correct [outfile] [infile1] [infile2] [<options>] |
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| = Positional Arguments = {{{ [outfile] description [infile1] description [infile2] description }}} = Required Flagged Arguments = {{{ None }}} = Optional Flagged Arguments = {{{ -?? [??] description description }}} = Outputs = {{{ orig - averaged and motion corrected volume }}} = Example 1 = {{{ mri_motion_correct ../orig 002 003 }}} = See Also = ["minctrac"] = Author = JaneSmith = Links = FreeSurfer, FsFast |
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| ## For example: ["Belliveau1991"] ["References/NameYear"] = Description = mri_motion_correct is a ["minctracc"] wrapper for averaging ["COR"] volumes |
[[References/Lastname###]] |
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| = Methods Description = = Category = ## For example: CategoryFreeSurferCommandVolumeConversion CategoryFreeSurferCommandMotionCorrection |
= Author/s = BruceFischl |
Index
Contents
Name
mri_motion_correct - averages a number of volumes and performs MotionCorrection
Synopsis
mri_motion_correct outvol invol1 invol2 [<options>]
Arguments
Positional Arguments
outvol |
description |
invol1 |
description |
invol2 |
description |
Required Flagged Arguments
None
Optional Flagged Arguments
-?? [??] |
description |
Outputs
orig |
averaged and motion corrected volume |
Description
description
Examples
Example 1
mri_motion_correct ../orig 002 003
description
Bugs
None
See Also
Links
Methods Description
??
References
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>