Results 1 - 12 of 12 results out of about 3237 pages. (0.62 seconds)

recon-all . . . 8 matches
... proceed to run -autorecon3 || ||-autorecon2-cp ||process stages 12-23 (uses -f w/ mri_normalize, -keep w/ mri_seg) || ||-autorecon2-wm ||process stages 15-23 || ||-autorecon2-pia...

34.9k - rev: 47 (current) last modified: 2017-12-08 18:23:09

ReconAllDevTable . . . 3 matches
...| ||talairach.xfm || ||<style="text-align:left" |1>-[[normalization]] ||nu.mgz ||[[mri_normalize]] -g 1 -mprage nu.mgz T1.mgz ||T1.mgz || ||<style="text-align:left" |3>-[[skullstr...

18.2k - rev: 277 (current) last modified: 2017-02-17 11:53:55

normalization2 . . . 2 matches
... Creates a new brain.mgz volume. The -autorecon2-cp stage begins here. If -noaseg flag is used, then aseg.mgz is not used by mri_normalize. === Programs === * [[mri_normalize]]...

0.4k - rev: 1 (current) last modified: 2009-06-03 16:20:24

ReconAllTableStableV5.3 . . . 2 matches
...-n 2 --uchar transforms/talairach.xfm||nu.mgz || ||-[[normalization]] ||nu.mgz ||[[mri_normalize]] -g 1 nu.mgz T1.mgz ||T1.mgz || ||<style="text-align: left;" |3>-[[skullstrip]] |...

13.7k - rev: 3 (current) last modified: 2015-05-08 15:10:28

ReconAllTableStableV5.1 . . . 2 matches
...-n 2 --uchar transforms/talairach.xfm||nu.mgz || ||-[[normalization]] ||nu.mgz ||[[mri_normalize]] -g 1 nu.mgz T1.mgz ||T1.mgz || ||<style="text-align: left;" |3>-[[skullstrip]] |...

13.4k - rev: 7 (current) last modified: 2012-03-26 16:45:23

ReconAllTableStableV5 . . . 2 matches
...airach_avi.log ||transforms/talairach_avi.log || ||-[[normalization]] ||nu.mgz ||[[mri_normalize]] -g 1 nu.mgz T1.mgz ||T1.mgz || ||<style="text-align: left;" |5>-[[skullstrip]] |...

13.4k - rev: 3 (current) last modified: 2012-03-26 16:47:16

ReconAllStableTablev4 . . . 2 matches
...<bgcolor='#FFFFE0'>-normalization||<bgcolor='#E0E0FF'>nu.mgz||<bgcolor='#E0E0FF'>[[mri_normalize]] -g 1 nu.mgz T1.mgz||<bgcolor='#E0E0FF'>T1.mgz|| ||<|3(bgcolor='#FFFFE0'>-skullst...

15.1k - rev: 8 (current) last modified: 2012-03-26 16:47:44

OtherUsefulFlags . . . 2 matches
...ign:left;" |3>-[[normalization2]] ||brainmask.mgz ||<style="text-align:left;" |3>[[mri_normalize]] -mprage -aseg aseg.presurf.mgz -mask brainmask.mgz norm.mgz brain.mgz ||<style="...

29.7k - rev: 135 (current) last modified: 2017-04-25 13:53:01

normalization . . . 1 match
...ensity of the white matter is 110. If there are problems with the normalization, users can add control points. See also [[normalization2]]. === Programs === * [[mri_normalize]]...

0.5k - rev: 2 (current) last modified: 2009-06-03 16:08:31

mri_watershed . . . 1 match
...o correction is applied to the intermediate result. = Bugs = None = See Also = [[mri_normalize]] = Links = FreeSurfer, FsFast = Methods Description = {{{ The "watershed" segme...

4.9k - rev: 29 (current) last modified: 2018-01-04 10:17:45

FreeSurferCommandsIntensityNormalization . . . 1 match
... * [[mri_normalize]]...

0.0k - rev: 2 (current) last modified: 2008-04-29 11:45:06

FreeSurferCommands . . . 1 match
...t]] * [[mri_robust_template]] * [[mri_nu_correct.mni]] * [[talairach]] * [[mri_normalize]] * [[mri_watershed]] * [[mri_em_register]] * [[mri_ca_normalize]] * [[mri...

1.7k - rev: 23 (current) last modified: 2011-09-19 15:19:48