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## See HelpOnCommandTemplate for description of formatting ## ## Note: If you are modifying this page please refer to the ## CommandTemplate page and confirm that this page has the latest ## CommandTemplate formatting = Name = mri_tessellate - creates surface by tessellating given input volume = Synopsis = mri_tessellate [<options>] [input volume] [label-value] [output surface] = Positional Arguments = || [input volume] || COR, .mgh, or .mgz volume || || [label-value] || integer, if input is filled volume, 127 is rh, 255 is lh || || [output surface] || binary surface of the tessellation || = Required Flagged Arguments = None = Optional Flagged Arguments = || -a || tessellate the surface of all voxels with different labels || || -n || save surface with real RAS coordinates where c_(r,a,s) != 0 || = Outputs = || [output surface] || surface file, typically ?h.orig || = Description = description = Example 1 = mri_tessellate $SUBJECTS_DIR/subjid/mri/filled 127 rh.orig description = Example 2 = mri_tessellate $SUBJECTS_DIR/subjid/mri/aseg 17 lh.hippocampus description = See Also = ["othercommand1"], ["othercommand2"] = Author/s = BruceFischl = Links = FreeSurfer, FsFast = References = ["References/Lastname###"] = Reporting Bugs = Report bugs to <analysis-bugs@nmr.mgh.harvard.edu> = Methods Description = {{{ description description }}} = Category = CategoryFreeSurferCommands |
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## For example: CategoryFreeSurferCommandVolumeConversion Category``Stream``Function |
CategoryFreeSurferCommands |
Name
mri_tessellate - creates surface by tessellating given input volume
Synopsis
mri_tessellate [<options>] [input volume] [label-value] [output surface]
Positional Arguments
[input volume] |
COR, .mgh, or .mgz volume |
[label-value] |
integer, if input is filled volume, 127 is rh, 255 is lh |
[output surface] |
binary surface of the tessellation |
Required Flagged Arguments
None
Optional Flagged Arguments
-a |
tessellate the surface of all voxels with different labels |
-n |
save surface with real RAS coordinates where c_(r,a,s) != 0 |
Outputs
[output surface] |
surface file, typically ?h.orig |
Description
description
Example 1
mri_tessellate $SUBJECTS_DIR/subjid/mri/filled 127 rh.orig
description
Example 2
mri_tessellate $SUBJECTS_DIR/subjid/mri/aseg 17 lh.hippocampus
description
See Also
["othercommand1"], ["othercommand2"]
Author/s
Links
References
["References/Lastname###"]
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>
Methods Description
description description
Category
Name
mri_tessellate - creates surface by tessellating given input volume
Synopsis
mri_tessellate [<option>] [input volume] [label-value] [output surface]
Positional Arguments
[input volume] COR, .mgh, or .mgz volume [label-value] integer, if input is filled volume, 127 is rh, 255 is lh [output surface] binary surface of the tessellation
Optional Flagged Arguments
-a tessellate the surface of all voxels with different labels -n save surface with real RAS coordinates where c_(r,a,s) != 0
Outputs
surface file, typically ?h.orig
Example 1
mri_tessellate $SUBJECTS_DIR/subjid/mri/filled 127 rh.orig
Example 2
mri_tessellate $SUBJECTS_DIR/subjid/mri/aseg 17 lh.hippocampus
See Also
["othercommand1"], ["othercommand2"]
Author
Links
Description
References
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>
Methods Description
description description