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 ["othercommand1"]

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 Report bugs to <analysis-bugs@nmr.mgh.harvard.edu> Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>
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 CategoryFreeSurferCommandSkullStripping CategoryFreeSurferCommandSkullStripping

Name

mri_watershed - strips skull and other outer non-brain voxels from a normalized T1 volume

Synopsis

mri_watershed arg1 -i <arg2> -o <arg3> [<options>]

Positional Arguments

arg1
  description
  description

Required Flagged Arguments

-i <arg2> 
  description
  description

-o <arg3>
  description
  description

Optional Flagged Arguments

-f <fvalue>
  description
  description

-g <gvalue>
  description
  description

Outputs

volume1 - description
volume2 - description

Example 1

mri_watershed foo -i f -o out

Example 2

mri_watershed foo -i f -o out -f fvalue

See Also

["othercommand1"], ["othercommand2"]

Author

JaneSmith

Links

FreeSurfer

References

["References/NameYear"]

Reporting Bugs

Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

Category

CategoryFreeSurferCommandSkullStripping

mri_watershed (last edited 2018-01-04 10:17:45 by MorganFogarty)