Results 1 - 15 of 15 results out of about 3744 pages. (0.97 seconds)
- mris_ca_train . . . 4 matches
- ... onto the surfaces using [[mris_sample_parc]]. This information is then used by [[mris_ca_label]] to automatically assign a neuroanatomical label to each location on a cortical s...
- ReconAllDevTable . . . 3 matches
- ...-align:left;" |3>-[[cortparc]] ||aseg.presurf.mgz ||<style="text-align:left;" |3>[[mris_ca_label]] -l ../label/lh.cortex.label -aseg mri/aseg.presurf.mgz <subjid> ?h ?h.sphere.reg...
- OtherUsefulFlags . . . 3 matches
- ...-align:left;" |3>-[[cortparc]] ||aseg.presurf.mgz ||<style="text-align:left;" |3>[[mris_ca_label]] -l ../label/lh.cortex.label -aseg mri/aseg.presurf.mgz <subjid> ?h ?h.sphere.reg...
- LongitudinalProcessing45 . . . 3 matches
- ...[mris_smooth]], [[mris_fix_topology]], [[mris_topo_fixer]], [[mris_sphere]], and [[mris_ca_label]])
=== Input (-i) ===
Copy the {{{orig/00?.mgz}}} from the cross sectionals.
==...
- LongitudinalProcessing . . . 3 matches
- ...[mris_smooth]], [[mris_fix_topology]], [[mris_topo_fixer]], [[mris_sphere]], and [[mris_ca_label]])
=== Input (-i) ===
Copy the {{{orig/00?.mgz}}} from the cross sectionals.
==...
- recon-all . . . 2 matches
- ...s_make_surfaces]]
* [[mri_surf2vol]]
* [[mris_register]]
* [[mrisp_paint]]
* [[mris_ca_label]]
* [[mris_anatomical_stats]]
* [[mri_aparc2aseg]]
== Notification Files ==
Not...
- mris_sample_parc . . . 2 matches
- ...annotated subjects. The information output by [[mris_ca_train]] is then used by [[mris_ca_label]] to automatically assign a neuroanatomical label to each location on a cortical s...
- cortparc . . . 2 matches
- ...m the cortical model
(sulcus and curvature), and neuroanatomical convention.
Calls mris_ca_label. -cortparc creates label/?h.aparc.annot, and
-cortparc2 creates /label/?h.aparc.a...
- ReconAllTableStableV5.3 . . . 2 matches
- ...t;" |2>-[[cortparc]] ||aseg.mgz, ?h.cortex.label ||<style="text-align: left;" |2>[[mris_ca_label]] -l ../label/lh.cortex.label -aseg mri/aseg.mgz <subjid> ?h ?h.sphere.reg $FREESU...
- ReconAllTableStableV5.1 . . . 2 matches
- ...t;" |2>-[[cortparc]] ||aseg.mgz, ?h.cortex.label ||<style="text-align: left;" |2>[[mris_ca_label]] -l ../label/lh.cortex.label -aseg mri/aseg.mgz <subjid> ?h ?h.sphere.reg $FREESU...
- ReconAllTableStableV5 . . . 2 matches
- ...="text-align: left;" |2>-[[cortparc]] ||aseg.mgz ||<style="text-align: left;" |2>[[mris_ca_label]] -aseg mri/aseg.mgz <subjid> ?h ?h.sphere.reg $FREESURFER_HOME/average/?h.curvatu...
- ReconAllStableTablev4 . . . 2 matches
- ...(bgcolor='#FFFFE0'>-cortparc||<bgcolor='#E0E0FF'>aseg.mgz||<|2(bgcolor='#E0E0FF'>[[mris_ca_label]] -aseg mri/aseg.mgz <subjid> ?h ?h.sphere.reg $FREESURFER_HOME/average/?h.curvatu...
- CorticalParcellation . . . 2 matches
- ...|top]]
= Cortical Parcellation =
The FreeSurfer utilities [[mris_ca_train]] and [[mris_ca_label]] together implement a technique for automatically assigning a neuroanatomical lab...
- FreeSurferCommandsSurfaceParcellation . . . 1 match
- ... * [[mris_sample_parc]]
* [[mris_ca_label]]
* [[mris_ca_train]]...
- FreeSurferCommands . . . 1 match
- ...e_surfaces]]
* [[mris_surf2vol]]
* [[mris_register]]
* [[mrisp_paint]]
* [[mris_ca_label]]
* [[mris_anatomical_stats]]
* [[mri_aparc2aseg]]
== Volume ==
<<Include(Fr...