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'''Index'''
<<TableOfContents>>


= Name =
mris_make_average_surface -  This program will average a set of surface coordinates and generate an average surface (using Talairach coordinatess and spherical transform).

= Synopsis =
mris_make_average_surface [options] <hemi> <output surf name> <canon surface> <output subject name> <subject> ...  <output subject name >


= Arguments =
== Positional Arguments ==
|| hemi || brief description ||    ||
|| output surf name || brief description ||    ||
|| canon surface || brief description ||    ||
|| output subject name || brief description ||    ||
|| subject || brief description ||    ||
|| output subject name || brief description ||    ||

== Required Flagged Arguments ==
|| -flag1 ?? || brief description || detailed description (eg, help file information) ||
|| -flag2 ?? || brief description || detailed description (eg, help file information) ||

== Optional Flagged Arguments ==
|| -flag3 ?? || brief description ||detailed description (eg, help file information) ||
|| -flag4 ?? || brief description ||detailed description (eg, help file information) ||
 
= Outputs =
|| ?? || description ||
|| ?? || description ||

= Description =
This program will generate an average of the orig surfaces of all the subjects specified (unless the -s <surface name> flag is used) the transform defaults to talairach.xfm in the subject's mri/transforms directory, but can be changed using the -x <xform name> switch.


= Examples =
== Example 1 ==
Command:

Description:

== Example 2 ==
Command:

Description:

= Bugs =
None

= See Also =
[[make_average_subject]], [[othercommand2]]

= Links =
FreeSurfer, FsFast

= Methods Description =
{{{
N/A
}}}

= References =
[[References/Lastname###]]

= Reporting Bugs =
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

= Author/s =
DougGreve, BruceFischl