Index TableOfContents

Name

mris_make_surfaces - Generates surface files for cortical and white matter surfaces, curvature file for cortical thickness and surface file estimate for layer IV of cortical sheet

Synopsis

mris_make_surfaces [options] <subject name> <hemisphere>

Arguments

Positional Arguments

Subject Name

Hemisphere

r(right) or l(left) brain hemisphere

Required Flagged Arguments

none

Optional Flagged Arguments

-q

Omit self-intersection and only generate gray/white surface

-c

Create curvature and area files from white matter surface

-a <avgs>

Average curvature values <avgs> times (default=10)

-whiteonly

Only generate white matter surface

-orig_white <surf>

specify a white surface to start with

-orig_pial <surf>

specify a white surface to start with

-w <value>

unknown

Outputs

??

description

??

description

Description

This program positions the tessellation of the cortical surface at the white matter surface, then the gray matter surface and generate surface files for these surfaces as well as a 'curvature' file for the cortical thickness, and a surface file which approximates layer IV of the cortical sheet.

Examples

Example 1

Command:

Description:

Example 2

Command:

Description:

Bugs

None

See Also

["othercommand1"], ["othercommand2"]

Links

FreeSurfer, FsFast

Methods Description

N/A

References

["References/Lastname###"]

Reporting Bugs

Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

Author/s

DougGreve, BruceFischl