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'''Index'''
<<TableOfContents>>


= Name =
 mris_thickness - Estimates thickness of the cortical surface

= Synopsis =
 mris_thickness [options] <subject name> <hemi> <thickness file>

= Arguments =
== Positional Arguments ==
|| Subject name ||  ||    ||
|| Hemi|| Brain hemisphere (r-right, l-left) ||   ||
|| Thickness file name ||  ||    ||

== Required Flagged Arguments ==
none

== Optional Flagged Arguments ==
|| -max <max> || Maximum threshold for thickness measurements (default=5mm) ||   ||
 
= Outputs =
|| output surface || Curvature file ||

= Description =
This program measures the thickness of the cortical surface and writes the resulting measurement into a 'curvature' file <thickness file>.


= Examples =
== Example 1 ==
Command :

description

== Example 2 ==
Command:

description

= Bugs =
None

= See Also =
[[othercommand1]], [[othercommand2]]

= Links =
FreeSurfer, FsFast

= Methods Description =
{{{
N/A
}}}

= References =
[[References/Lastname###]]

= Reporting Bugs =
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

= Author/s =
DougGreve, BruceFischl