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paint-sess paint
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paint-sess -analysis analysisname -contrast contrastname -map mapname -offset n -sf sessid paint [<options>] invol hemi surf outvol
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== Positional Arguments ==
||invol|| input volume ||
||hemi || hemisphere ||
||surf ||surface ||
||outvol||output volume ||
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=== General ===
||-analysis analysisname||session-level functional analysis name||
||-contrast contrastname||contrast name||
||-sf sessid || ||
=== For Group Analysis ===
|| -subject subjectname || name of subject on which to paint (with group data) ||
|| -space spacename || space from which to paint (native, tal, sph)||
|| -isxavg method || fixed or random (with group data)||
none
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|| -map mapname || <sig>, minsig, iminsig, t||
|| -offset n || 0-based image offset||
||-spacedir spacedir || get data from spacedir||
||-hemi hemisphere ||with sph space <lh rh>||
|| -surf surface ||surface on which to paint (white)||
||-umask umask ||set unix file permission mask||
||-scriptonly || do not run, just generate a script||
||-version ||print version and exit||
|| -df srchdirfile ...|| ||
|| -d srchdir ...|| ||
||-imageoffset n || zero-based frame number to paint. default=0||
||-nslices n || number of input slices||
||-regdat fname || name of register file. default=register.dat||
||-dmax dist || distance (mm) to project along normal. default=0||
||-dstep stepsize || size (mm) of projection step. default=0.25||
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|| overlay.w || overlay file || || ??|| ?? ||
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DougGreve BruceFischl

Navigation(children) Index TableOfContents

Name

paint

Synopsis

paint [<options>] invol hemi surf outvol

Arguments

Positional Arguments

invol

input volume

hemi

hemisphere

surf

surface

outvol

output volume

Required Flagged Arguments

none

Optional Flagged Arguments

-imageoffset n

zero-based frame number to paint. default=0

-nslices n

number of input slices

-regdat fname

name of register file. default=register.dat

-dmax dist

distance (mm) to project along normal. default=0

-dstep stepsize

size (mm) of projection step. default=0.25

Outputs

??

??

Description

??

Examples

Example 1

??

Bugs

none

See Also

??

Links

FreeSurfer, FsFast

Methods Description

??

References

??

Reporting Bugs

Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>

Author/s

BruceFischl

paint (last edited 2008-04-29 11:45:41 by localhost)