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| [[https://www.sciencedirect.com/science/article/pii/S1053811921004833|Joint super-resolution and synthesis of 1 mm isotropic MP-RAGE volumes from clinical MRI exams with scans of different orientation, resolution and contrast]]. JE Iglesias, B Billot, Y Balbastre, A Tabari, J Conklin, RG Gonzalez, DC Alexander, P Golland, BL Edlow, B Fischl, for the ADNI. Neuroimage, 118206 (2021). * [[https://www.science.org/doi/10.1126/sciadv.add3607|SynthSR: a public AI tool to turn heterogeneous clinical brain scans into high-resolution T1-weighted images for 3D morphometry]]. JE Iglesias, B Billot, Y Balbastre, C Magdamo, S Arnold, S Das, B Edlow, D Alexander, P Golland, B Fischl. Science Advances, 9(5), eadd3607 (2023). If you use the Hyperfine version, please cite this paper as well: * |
* [[https://www.arxiv.org|Cortical analysis of heterogeneous clinical brain MRI scans for large-scale neuroimaging studies]]. K Gopiath, DN Greeve, S Das, S Arnold, C Magdamo, JE Iglesias * [[https://www.sciencedirect.com/science/article/pii/S1053811921004833|Joint super-resolution and synthesis of 1 mm isotropic MP-RAGE volumes from clinical MRI exams with scans of different orientation, resolution and contrast]]. JE Iglesias, B Billot, Y Balbastre, A Tabari, J Conklin, RG Gonzalez, DC Alexander, P Golland, BL Edlow, B Fischl, for the ADNI. Neuroimage, 118206 (2021). * [[https://www.science.org/doi/10.1126/sciadv.add3607|SynthSR: a public AI tool to turn heterogeneous clinical brain scans into high-resolution T1-weighted images for 3D morphometry]]. JE Iglesias, B Billot, Y Balbastre, C Magdamo, S Arnold, S Das, B Edlow, D Alexander, P Golland, B Fischl. Science Advances, 9(5), eadd3607 (2023). |
recon-all-clinical
This functionality is now available in the developer version of FreeSurfer.
Author: Karthik Gopinath
E-mail: kgopinath[at]mgh[dot]harvard[dot]edu
Please post your questions on this module to the FreeSurfer mailing list at freesurfer[at]nmr.mgh.harvard.edu rather than directly contacting the author.
If you use this package in your analysis, please cite:
Cortical analysis of heterogeneous clinical brain MRI scans for large-scale neuroimaging studies. K Gopiath, DN Greeve, S Das, S Arnold, C Magdamo, JE Iglesias
Joint super-resolution and synthesis of 1 mm isotropic MP-RAGE volumes from clinical MRI exams with scans of different orientation, resolution and contrast. JE Iglesias, B Billot, Y Balbastre, A Tabari, J Conklin, RG Gonzalez, DC Alexander, P Golland, BL Edlow, B Fischl, for the ADNI. Neuroimage, 118206 (2021).
SynthSR: a public AI tool to turn heterogeneous clinical brain scans into high-resolution T1-weighted images for 3D morphometry. JE Iglesias, B Billot, Y Balbastre, C Magdamo, S Arnold, S Das, B Edlow, D Alexander, P Golland, B Fischl. Science Advances, 9(5), eadd3607 (2023).