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||8:30 - 9:00 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] ||talk/tutorial ||Allison Stevens || ||9:00 - 9:15 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsjargon.ppt|Intro to FreeSurfer Jargon]] ||talk || Allison Stevens & Lilla Zollei || ||9:15 - 9:30 ||'''break''' || || || ||9:30 - 10:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/BostonMay2014/freesurfer.intro.ppt|Introduction to Freesurfer]] ||talk ||Emily Lindemer || ||10:00 - 11:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject]] ||talk ||Emily Lindemer || ||11:00 - 11:40 ||NRU - A high resolution in vivo atlas of the human brain's serotonin system || || || ||11:40 - 12:40 ||'''Lunch''' ||-- ||-- || ||12:40 - 1:00 ||Freeview demonstration ||[[FreeviewGuide|demo]] ||Allison Stevens || ||1:00 - 2:00 ||[[FsTutorial/OutputData_freeview|Interaction with Individual Subject Data Tutorial]] ||tutorial ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/staff2013.jpg|staff]] || ||2:00 - 2:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/BostonMay2014/freesurfer.failure_modes.ppt|FreeSurfer Troubleshooting]] ||talk ||Allison Stevens || ||2:45 - 3:00 ||Freeview Troubleshooting demonstration ||[[FreeviewGuide|demo]] ||Allison Stevens || ||3:00 - 3:20 ||'''break''' || || || ||3:20 - 4:20 ||[[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff || ||4:20 - 5:20 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/QArecon.ppt|Quality Checking a Recon]] ||demo ||Allison Stevens || ||5:20 - 5:30 ||Question and Answer Session (Answers to online questions [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QuestionAnswers|here]]) ||talk ||staff || |
||9:00 - 9:30 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] ||talk/tutorial ||Allison Stevens || ||9:30 - 9:45 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsjargon.ppt|Intro to FreeSurfer Jargon]] ||talk || Allison Stevens & Lilla Zollei || ||9:45 - 10:00 ||'''break''' || || || ||10:00 - 10:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/BostonMay2014/freesurfer.intro.ppt|Introduction to Freesurfer]] ||talk ||Emily Lindemer || ||10:30 - 11:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject]] ||talk ||Emily Lindemer || ||11:30 - 11:45 ||Freeview demonstration ||[[FreeviewGuide|demo]] ||Allison Stevens || ||11:45 - 12:15 ||[[FsTutorial/OutputData_freeview|Interaction with Individual Subject Data Tutorial]] ||tutorial ||staff || ||12:15 - 1:15 ||'''Lunch''' ||-- ||-- || ||1:15 - 1:45 ||[[FsTutorial/OutputData_freeview|Interaction with Individual Subject Data Tutorial]] ||tutorial ||staff || ||1:45 - 2:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/BostonMay2014/freesurfer.failure_modes.ppt|FreeSurfer Troubleshooting]] ||talk ||Allison Stevens || ||2:30 - 2:45 ||Freeview Troubleshooting demonstration ||[[FreeviewGuide|demo]] ||Allison Stevens || ||2:45 - 3:05 ||'''break''' || || || ||3:05 - 4:05 ||[[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff || ||4:05 - 5:05 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/QArecon.ppt|Quality Checking a Recon]] ||demo ||Allison Stevens || ||5:05 - 5:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.surface-based-analysis.ppt|Surface-based Analysis: Intersubject Smoothing & Registration]] ||talk ||Lilla Zollei || |
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||11:30 - 12:10 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.surface-based-analysis.ppt|Surface-based Analysis: Intersubject Smoothing & Registration]] ||talk ||Lilla Zollei || ||9:00 - 9:30 ||** [[http://surfer.nmr.mgh.harvard.edu/pub/docs/FS_GLM_Spring2016.ppt|Basics of Group Analysis]] ||talk ||Emily Lindemer || ||9:30 - 10:10 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ERL.ppt|Group Analysis]] ||talk ||Emily Lindemer || |
||9:00 - 9:40 ||NRU - A high resolution in vivo atlas of the human brain's serotonin system || || || ||9:40 - 10:20 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ERL.ppt|Group Analysis]] ||talk ||Emily Lindemer || |
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||8:30 - 9:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.dti.ppt|Multi-Modal Integration]] ||talk ||Lilla Zollei || ||1:10 - 2:25 ||[[FsTutorial/MultiModal_freeview|Multi-Modal Integration Tutorial]] ||tutorial ||staff || ||9:15 - 10:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/dmri,fs.ppt|Introduction to Diffusion MRI]] ||talk ||Lilla Zollei || |
||9:00 - 10:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.dti.ppt|Multi-Modal Integration]] ||talk ||Martin Reuter || ||10:00 - 11:00 ||[[FsTutorial/MultiModal_freeview|Multi-Modal Integration Tutorial]] ||tutorial ||staff || ||11:00 - 11:15 ||'''break''' || || ||11:15 - 12:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/dmri,fs.ppt|Introduction to Diffusion MRI]] ||talk ||Lilla Zollei || ||12:00 - 12:30 || Diffusion Tutorial || tutorial || staff|| |
FreeSurfer Course, August 10-12
Wednesday, August 10th - Introduction / Single Subject Analysis /Troubleshooting
Time |
Title |
Type |
Lecturer |
9:00 - 9:30 |
optional - Unix Tutorial for FreeSurfer Users |
talk/tutorial |
Allison Stevens |
9:30 - 9:45 |
optional - Intro to FreeSurfer Jargon |
talk |
Allison Stevens & Lilla Zollei |
9:45 - 10:00 |
break |
|
|
10:00 - 10:30 |
talk |
Emily Lindemer |
|
10:30 - 11:30 |
talk |
Emily Lindemer |
|
11:30 - 11:45 |
Freeview demonstration |
Allison Stevens |
|
11:45 - 12:15 |
tutorial |
staff |
|
12:15 - 1:15 |
Lunch |
-- |
-- |
1:15 - 1:45 |
tutorial |
staff |
|
1:45 - 2:30 |
talk |
Allison Stevens |
|
2:30 - 2:45 |
Freeview Troubleshooting demonstration |
Allison Stevens |
|
2:45 - 3:05 |
break |
|
|
3:05 - 4:05 |
tutorial |
staff |
|
4:05 - 5:05 |
demo |
Allison Stevens |
|
5:05 - 5:45 |
Surface-based Analysis: Intersubject Smoothing & Registration |
talk |
Lilla Zollei |
Thursday, August 11th - Group Analysis / ROI Analysis / Longitudinal
Time |
Title |
Type |
Lecturer |
9:00 - 9:40 |
NRU - A high resolution in vivo atlas of the human brain's serotonin system |
|
|
9:40 - 10:20 |
talk |
Emily Lindemer |
|
10:20 - 10:40 |
break |
|
|
10:40 - 11:20 |
tutorial |
staff |
|
11:20 - 11:40 |
talk |
Emily Lindemer |
|
11:40 - 12:00 |
QDEC demonstration |
demo |
Martin Reuter |
12:00 - 1:00 |
Lunch |
-- |
-- |
1:00 - 1:20 |
tutorial |
staff |
|
1:20 - 2:00 |
tutorial |
staff |
|
2:00 - 2:30 |
talk |
Martin Reuter |
|
2:30 - 2:50 |
break |
|
|
2:50 - 3:20 |
tutorial |
staff |
|
3:20 - 3:50 |
talk |
Martin Reuter |
|
3:50 - 4:30 |
tutorial |
staff |
|
5:30 - 5:45 |
Question and Answer Session (Answers to online questions here) |
talk |
staff |
Friday, August 12th - Multimodal / Diffusion / Future Directions
Time |
Title |
Type |
Lecturer |
9:00 - 10:00 |
talk |
Martin Reuter |
|
10:00 - 11:00 |
tutorial |
staff |
|
11:00 - 11:15 |
break |
|
|
11:15 - 12:00 |
talk |
Lilla Zollei |
|
12:00 - 12:30 |
Diffusion Tutorial |
tutorial |
staff |
11:40 - 12:40 |
Lunch |
-- |
-- |
11:40 - 12:40 |
NRU - PLS applied to PET data in SAD |
-- |
-- |
2:25 - 2:45 |
break & Evaluation |
|
|
2:45 - 3:35 |
talk |
Lilla Zollei |
|
3:35 - 4:20 |
tutorial |
staff |
|
4:20 - 4:50 |
Future Directions |
talk |
Martin Reuter |
4:50 - 5:05 |
Question and Answer Session (Answers to online questions here), FsQuiz |
talk |
staff |
No time? |
optional technical talk - Registration Methods |
talk |
Lilla Zollei |