Deletions are marked like this. | Additions are marked like this. |
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|| 8:00 - 8:30 || '''optional -''' [[attachment:unix_tutorial.ppt|Unix Tutorial for FreeSurfer Users|&do=get]] [[http://www.ee.surrey.ac.uk/Teaching/Unix|1. Surrey]], [[http://docstore.mik.ua/orelly/linux/lnut/index.htm|2. O'Reilly]] || tutorial || Allison Stevens || || 8:30 - 9:00 || Course Registration || sign-in || [[attachment:boston_fs_course_jan2009.jpg|staff|&do=get]] || || 9:00 - 9:30 || [[attachment:freesurfer.intro.2009.ppt|Introduction to Freesurfer|&do=get]]|| talk || Bruce Fischl || || 9:30 - 10:00 || [[attachment:freesurfer.reliability.2009.ppt|Accuracy, Reliability and Validation|&do=get]] || talk || David Salat || |
|| 8:00 - 8:30 || '''optional -''' [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial.ppt|Unix Tutorial for FreeSurfer Users|&do=get]] [[http://www.ee.surrey.ac.uk/Teaching/Unix|1. Surrey]], [[http://docstore.mik.ua/orelly/linux/lnut/index.htm|2. O'Reilly]] || tutorial || Allison Stevens || || 8:30 - 9:00 || Course Registration || sign-in || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/boston_fs_course_jan2009.jpg|staff|&do=get]] || || 9:00 - 9:30 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.2009.ppt|Introduction to Freesurfer|&do=get]]|| talk || Bruce Fischl || || 9:30 - 10:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.reliability.2009.ppt|Accuracy, Reliability and Validation|&do=get]] || talk || David Salat || |
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|| 10:15 - 11:15 || [[attachment:fsrecon.ppt|Analyzing the Individual Subject|&do=get]] || talk|| Bruce Fischl || | || 10:15 - 11:15 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject|&do=get]] || talk|| Bruce Fischl || |
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|| 1:00 - 1:30 || [[attachment:freesurfer.applications.2009.ppt|FreeSurfer Applications|&do=get]] || talk || David Salat || || 1:30 - 2:00 || [[attachment:fs.surface-based-analysis.ppt|Surface-based Smoothing/Surface-based Registration|&do=get]] || talk || Doug Greve || |
|| 1:00 - 1:30 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.2009.ppt|FreeSurfer Applications|&do=get]] || talk || David Salat || || 1:30 - 2:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.surface-based-analysis.ppt|Surface-based Smoothing/Surface-based Registration|&do=get]] || talk || Doug Greve || |
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|| 2:15 - 3:00 || [[attachment:freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons|&do=get]] || talk || Doug Greve || | || 2:15 - 3:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons|&do=get]] || talk || Doug Greve || |
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|| 5:00 - 5:30 || [[attachment:freesurfer.longitudinal.ppt|Longitudinal FreeSurfer|&do=get]] || talk || Martin Reuter || | || 5:00 - 5:30 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer|&do=get]] || talk || Martin Reuter || |
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|| 5:30 - || '''optional -''' [[attachment:runningyourdata.ppt|Start Processing Your Own Data|&do=get]]|| one-on-one || Allison Stevens || | || 5:30 - || '''optional -''' [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/runningyourdata.ppt|Start Processing Your Own Data|&do=get]]|| one-on-one || Allison Stevens || |
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|| 9:00 - 10:00 || [[attachment:fs.roi.ppt|ROI Analysis|&do=get]] || talk || Doug Greve || | || 9:00 - 10:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] || talk || Doug Greve || |
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|| 11:00 - 11:15 || [[attachment:freesurfer.failure_modes.2009.ppt|Failure Modes|&do=get]] || talk || Bruce Fischl|| | || 11:00 - 11:15 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.2009.ppt|Failure Modes|&do=get]] || talk || Bruce Fischl|| |
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|| 1:00 - 2:15 || [[attachment:fs.multimodal-integration.ppt|Multi-Modal Integration: ROI and Surface-based Analysis|&do=get]] || talk || Doug Greve || | || 1:00 - 2:15 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration: ROI and Surface-based Analysis|&do=get]] || talk || Doug Greve || |
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|| 3:30 - 3:50 || [[attachment:CVS-lzollei.ppt|Combined Volume and Surface Registration|&do=get]] || talk || Lilla Zollei || || 3:50 - 4:10|| [[attachment:tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] || talk || Anastasia Yendiki || || 4:10 - 4:30 || [[attachment:freesurfer.inferring_architectonics.2009.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] || talk || Bruce Fischl || |
|| 3:30 - 3:50 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/CVS-lzollei.ppt|Combined Volume and Surface Registration|&do=get]] || talk || Lilla Zollei || || 3:50 - 4:10|| [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] || talk || Anastasia Yendiki || || 4:10 - 4:30 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.2009.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] || talk || Bruce Fischl || |
FreeSurfer Course, September 17 and 18, 2009
MGH, Charlestown Navy Yard, Building 149, Conference Room A
Thursday, September 17th - Introduction / Single Subject / Group Analysis
Time |
Title |
Type |
Lecturer |
8:00 - 8:30 |
optional - Unix Tutorial for FreeSurfer Users 1. Surrey, 2. O'Reilly |
tutorial |
Allison Stevens |
8:30 - 9:00 |
Course Registration |
sign-in |
|
9:00 - 9:30 |
talk |
Bruce Fischl |
|
9:30 - 10:00 |
talk |
David Salat |
|
10:00 - 10:15 |
break |
|
|
10:15 - 11:15 |
talk |
Bruce Fischl |
|
11:15 - 11:45 |
Tkmedit/Tksurfer demonstration |
demo |
Doug Greve |
11:45 - 12:15 |
tutorial |
staff |
|
12:15 - 1:00 |
lunch |
|
|
1:00 - 1:30 |
talk |
David Salat |
|
1:30 - 2:00 |
talk |
Doug Greve |
|
2:00 - 2:15 |
break |
|
|
2:15 - 3:00 |
talk |
Doug Greve |
|
3:00 - 4:00 |
tutorial |
staff |
|
4:00 - 4:15 |
QDEC demonstration |
demo |
Nick Schmansky |
4:15 - 5:00 |
tutorial |
staff |
|
5:00 - 5:30 |
talk |
Martin Reuter |
|
5:30 - |
optional - FreeSurfer Installation on Personal Laptops |
one-on-one |
Nick Schmansky |
5:30 - |
optional - Start Processing Your Own Data |
one-on-one |
Allison Stevens |
Friday, September 18th - ROIs / Troubleshooting / Multi-Modal / QA / Future Directions
Time |
Title |
Type |
Lecturer |
9:00 - 10:00 |
talk |
Doug Greve |
|
10:00 - 10:45 |
tutorial |
staff |
|
10:45 - 11:00 |
break |
|
|
11:00 - 11:15 |
talk |
Bruce Fischl |
|
11:15 - 12:15 |
Troubleshooting, Troubleshooting demonstration |
tutorial |
staff, Allison |
12:15 - 1:00 |
Working lunch Optional talk - Introduction to Diffusion Processing |
talk |
Lilla Zollei and David Salat |
1:00 - 2:15 |
talk |
Doug Greve |
|
2:15 - 3:15 |
tutorial |
staff |
|
3:15 - 3:30 |
break |
|
|
3:30 - 4:30 |
Future Directions of FreeSurfer: |
|
|
3:30 - 3:50 |
talk |
Lilla Zollei |
|
3:50 - 4:10 |
talk |
Anastasia Yendiki |
|
4:10 - 4:30 |
talk |
Bruce Fischl |
|
4:30 - 5:15 |
Question and Answer Session, FsQuiz |
talk |
staff |