Bug List from Stable 5.0.0

*Note: These bugs are found while running the Buckner40 data set.
see also: Buckner40Notes

Bug

Example

Fixed?

There's a difference between the orig surf and white surf after wm edits
--usually the orig surf is better

White surf does weird indentations even when wm voxels are present (white matter damage?)
--again orig surf is better here

Surfaces between temporal lobe and the cerebral cortex are usually crazy (random wm voxels)

Still some problems with calcarine area - aseg is correct yet the surfaces aren't

073_dev

Pial surf isn't correct at midline
(not incorrect but not pretty to look at)

073_dev

*Examples are found here
/autofs/cluster/freesurfer/test/subjects/x86_64/buckner_data/group_study_fs5.0.0_from_scratch