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|| 1:00 - 1:30 || '''Working lunch''' Optional talk - Application of Diffusion Imaging || talk || David Salat || || 1:00 - 1:30 || '''Working lunch''' Optional talk - Combined Gray Matter/White Matter Analysis of the Aging Brain || talk || David Salat ||

FreeSurfer Course, February 1 and 2, 2010

MGH, Charlestown Navy Yard, Building 149, Conference Room A

Monday, February 1st - Introduction / Single Subject / Group Analysis

Time

Title

Type

Lecturer

8:00 - 8:30

optional - Unix Tutorial for FreeSurfer Users 1. Surrey, 2. O'Reilly

tutorial

Allison Stevens

8:30 - 9:00

Course Registration

sign-in

staff

9:00 - 9:30

Introduction to Freesurfer

talk

Bruce Fischl

9:30 - 10:30

Analyzing the Individual Subject

talk

Bruce Fischl

10:30 - 10:45

break

10:45 - 11:15

Tkmedit/Tksurfer demonstration

demo

Doug Greve

11:15 - 11:45

Interaction with Individual Subject Data

tutorial

staff

11:45 - 12:15

Accuracy, Reliability and Validation

talk

David Salat

12:15 - 12:45

Working lunch Optional talk - Introduction to Diffusion Processing

talk

Lilla Zollei

12:45 - 1:15

Working lunch Optional talk - MRI Acquisition Methods for Morphometry

talk

Andre van der Kouwe

1:15 - 1:45

FreeSurfer Applications

talk

David Salat

1:45 - 2:15

Surface-based Smoothing/Surface-based Registration

talk

Doug Greve

2:15 - 2:30

break

2:30 - 3:15

Group Analysis / GLM / Multiple Comparisons

talk

Mert Sabuncu

3:15 - 4:15

Group Analysis / Multiple Comparisons - mri_glmfit

tutorial

staff

4:15 - 4:30

QDEC demonstration

demo

Nick Schmansky

4:30 - 5:15

Group Analysis - qdec

tutorial

staff

5:15 - 5:45

Longitudinal FreeSurfer

talk

Martin Reuter

5:45 -

optional - FreeSurfer Installation on Personal Laptops

one-on-one

Nick Schmansky

5:45 -

optional - Start Processing Your Own Data

one-on-one

Allison Stevens

Tuesday, February 2nd - ROIs / Troubleshooting / Multi-Modal / Q&A / Future Directions

Time

Title

Type

Lecturer

9:00 - 10:00

ROI Analysis

talk

Doug Greve

10:00 - 10:45

ROI Analysis

tutorial

staff

10:45 - 11:00

break

11:00 - 11:30

Failure Modes

talk

Bruce Fischl

11:30 - 12:30

Troubleshooting, Troubleshooting demonstration

tutorial

staff, Allison

12:30 - 1:00

Working lunch Optional demo - Step-by-Step Through a Recon

demo

TBD

1:00 - 1:30

Working lunch Optional talk - Combined Gray Matter/White Matter Analysis of the Aging Brain

talk

David Salat

1:30 - 2:45

Multi-Modal Integration: ROI and Surface-based Analysis

talk

Doug Greve

2:45 - 3:45

Multi-Modal Integration

tutorial

staff

3:45 - 4:00

break

4:00 - 5:00

Future Directions of FreeSurfer:

4:00 - 4:20

Combined Volume and Surface Registration

talk

Lilla Zollei

4:20 - 4:40

TRActs Constrained by UnderLying Anatomy (TRACULA)

talk

Anastasia Yendiki

4:40 - 5:00

Inferring architectonic boundaries from in-vivo MRI

talk

Bruce Fischl

5:00 - 5:30

Question and Answer Session, FsQuiz

talk

staff

FsTutorial/Feb2010CourseSchedule (last edited 2010-02-05 16:28:26 by NickSchmansky)