Diff for "FsTutorial/Jan2009CourseSchedule"

Differences between revisions 92 and 115 (spanning 23 versions)

Tuesday, January 20th - Introduction / Single Subject / Group Analysis

Time	Title	Type	Lecturer
8:00 - 9:00	Course Registration	sign-in	staff
8:00 - 8:30	optional - Unix Tutorial for FreeSurfer 1. Surrey, 2. O'Reilly	tutorial	Allison Stevens
9:00 - 9:20	Introduction to Freesurfer	talk	Bruce Fischl
9:20 - 10:00	FreeSurfer Applications	talk	David Salat
10:00 - 10:30	Accuracy, Reliability and Validation	talk	David Salat
10:30 - 10:45	break
10:45 - 11:45	Analyzing the Individual Subject	talk	Doug Greve
11:45 - 12:30	lunch		Barack Obama
12:30 - 1:00	Tkmedit/Tksurfer demonstration	demo	Doug Greve
1:00 - 1:30	Interaction with Individual Subject Data	tutorial	staff
1:30 - 2:45	Group Analysis / GLM / Multiple Comparisons	talk	Doug Greve
2:45 - 3:00	QDEC demonstration	demo	Nick Schmansky
3:00 - 3:15	break
3:15 - 4:15	Group Analysis / Multiple Comparisons - mri_glmfit	tutorial	staff
4:15 - 5:00	Group Analysis - qdec	tutorial	staff
5:00 -	optional - FreeSurfer Installation on Personal Laptops	one-on-one	Nick Schmansky
5:00 -	optional - Start Processing Your Own Data	one-on-one	Allison Stevens

Wednesday, January 21st - ROIs / Troubleshooting / Multi-Modal / QA / Future Directions

Time	Title	Type	Lecturer
9:00 - 10:00	ROI Analysis	talk	Doug Greve
10:00 - 10:45	ROI Analysis	tutorial	staff
10:45 - 11:00	break
11:00 - 11:15	Failure Modes	talk	Bruce Fischl
11:15 - 12:15	Troubleshooting	tutorial	staff
12:15 - 1:00	lunch
1:00 - 2:15	Multi-Modal Integration: ROI and Surface-based Analysis	talk	Doug Greve
2:15 - 3:15	Multi-Modal Integration	tutorial	staff
3:15 - 3:30	break
3:30 - 4:30	Question and Answer Session, FsQuiz	talk	staff
4:30 - 6:00	Future Directions of FreeSurfer:
4:30 - 5:00	Inferring architectonic boundaries from in-vivo MRI	talk	Bruce Fischl
5:00 - 5:20	Combined Volume and Surface Registration	talk	Lilla Zollei
5:20 - 5:40	TRActs Constrained by UnderLying Anatomy (TRACULA)	talk	Anastasia Yendiki
5:40 - 6:00	Automated segmentation of hippocampal subfields	talk	Koen Van Leemput

FsTutorial/Jan2009CourseSchedule (last edited 2009-12-11 16:12:06 by NickSchmansky)

-  ⇤ ← Revision 92 as of 2009-01-18 13:16:48 → 
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-|| 8:00 - 9:00 || Course Registration || sign-in || staff ||
+|| 8:00 - 9:00 || Course Registration || sign-in || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/boston_fs_course_jan2009.jpg|staff|&do=get]] ||
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-|| 9:00 - 9:20 || [[attachment:freesurfer.intro.2009.ppt|Introduction to Freesurfer|&do=get]]|| talk || Bruce Fischl ||
|| 9:20 - 10:00 || !FreeSurfer Applications || talk || David Salat ||
|| 10:00 - 10:30 || Reliability/Validation of !FreeSurfer || talk || David Salat ||
+|| 9:00 - 9:20 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.2009.ppt|Introduction to Freesurfer|&do=get]]|| talk || Bruce Fischl ||
|| 9:20 - 10:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.2009.ppt|FreeSurfer Applications|&do=get]] || talk || David Salat ||
|| 10:00 - 10:30 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.reliability.2009.ppt|Accuracy, Reliability and Validation|&do=get]] || talk || David Salat ||
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-|| 10:45 - 11:45 || [[attachment:freesurfer.recon.2007.ppt|Analyzing the Individual Subject|&do=get]] || talk|| Doug Greve ||
|| 11:45 - 12:30 || '''lunch''' || || B. Obama ||
+|| 10:45 - 11:45 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject|&do=get]] || talk|| Doug Greve ||
|| 11:45 - 12:30 || '''lunch''' || || [[http://www.cbsnews.com/stories/2009/01/08/national/inauguration09/main4707733.shtml | Barack Obama]] ||
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-|| 1:30 - 2:45 || [[attachment:freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons|&do=get]] || talk || Doug Greve ||
+|| 1:30 - 2:45 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons|&do=get]] || talk || Doug Greve ||
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-|| 9:00 - 9:45 || [[attachment:fs.roi.ppt|ROI Analysis|&do=get]] || talk || Doug Greve ||
|| 9:45 - 10:45 || [[FsTutorial/AnatomicalROI|ROI Analysis]] || tutorial || staff ||
+|| 9:00 - 10:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] || talk || Doug Greve ||
|| 10:00 - 10:45 || [[FsTutorial/AnatomicalROI|ROI Analysis]] || tutorial || staff ||
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-|| 11:00 - 11:15 || [[attachment:freesurfer.failure_modes.2009.ppt|Failure Modes|&do=get]] || talk || Bruce Fischl||
+|| 11:00 - 11:15 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.2009.ppt|Failure Modes|&do=get]] || talk || Bruce Fischl||
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-|| 1:00 - 2:15 || [[attachment:fs.multimodal-integration.ppt|Multi-Modal Integration: ROI and Surface-based Analysis|&do=get]] || talk || Doug Greve ||
+|| 1:00 - 2:15 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration: ROI and Surface-based Analysis|&do=get]] || talk || Doug Greve ||
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-|| 3:30 - 4:30 || Question and Answer Session || talk || staff ||
+|| 3:30 - 4:30 || Question and Answer Session, FsQuiz || talk || staff ||
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-|| 4:30 - 5:00 || [[attachment:freesurfer.inferring_architectonics.2009.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] || talk || Bruce Fischl ||
|| 5:00 - 5:20 || [[attachment:CVS-lzollei.ppt|Combined Volume and Surface Registration|&do=get]] || talk || Lilla Zollei ||
|| 5:20 - 5:40 || TRActs Constrained on !UnderLying Anatomy (TRACULA) || talk || Anastasia Yendiki ||
|| 5:40 - 6:00 || [[attachment:HippocampalSubfields-Koen.ppt|Automated segmentation of hippocampal subfields|&do=get]] || talk || Koen Van Leemput ||
+|| 4:30 - 5:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.2009.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] || talk || Bruce Fischl ||
|| 5:00 - 5:20 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/CVS-lzollei.ppt|Combined Volume and Surface Registration|&do=get]] || talk || Lilla Zollei ||
|| 5:20 - 5:40 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] || talk || Anastasia Yendiki ||
|| 5:40 - 6:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/HippocampalSubfields-Koen.ppt|Automated segmentation of hippocampal subfields|&do=get]] || talk || Koen Van Leemput ||