- If preferred, one can use the edited cross sectional data to create a new base. However, edits made to the brain.finalsurfs volume of the cross sectional data sets will not transfer to the base since the base creation takes off from the norm.mgz of the cross data sets.
Therefore, in order to fix the base, one must edit the brain.finalsurfs volume of the base as follows:
A. Below is a visualization of the problem area in the base: brain.finalsurfs.mgz, slice 89 at coordinates 98, 172, 89 in right hemi. The problem area extends through slices 85 - 94.
And here is the area zoomed in: