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||1:30 - 2:00 ||[[FsTutorial/OutputData_freeview|Interaction with Individual Subject Data Tutorial]] ||tutorial ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/staff2013.jpg|staff]] ||
||2:00 - 2:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/freesurfer.failure_modes.ppt|FreeSurfer Troubleshooting|&do=get]] ||talk || Bruce Fischl ||
||2:30 - 2:50 ||'''break''' || || ||
||2:50 - 3:50 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/QArecon.ppt | Quality Checking a Recon]] ||demo ||Allison Stevens ||
||3:50 - 5:00 || [[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff ||
||1:30 - 2:30 ||[[FsTutorial/OutputData_freeview|Interaction with Individual Subject Data Tutorial]] ||tutorial ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/staff2013.jpg|staff]] ||
||2:30 - 3:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/freesurfer.failure_modes.ppt|FreeSurfer Troubleshooting|&do=get]] ||talk || Bruce Fischl ||
||3:00 - 3:20 ||'''break''' || || ||
||3:20 - 4:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/QArecon.ppt | Quality Checking a Recon]] ||demo ||Allison Stevens ||
||4:00 - 5:00 || [[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff ||
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||9:40 - 10:20 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/freesurfer.groupanalysis.ppt|Group Analysis]] ||talk || Eugenio Iglesias || ||9:40 - 10:20 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/freesurfer.groupanalysis.ppt|Group Analysis]] ||talk || ? ||
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||11:20 - 11:40 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/freesurfer.multipecomparisons.ppt|Multiple Comparisons]] ||talk || Eugenio Iglesias ||
||11:40 - 12:00 ||QDEC demonstration ||demo ||Eugenio Iglesias ||
||11:20 - 11:40 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/freesurfer.multipecomparisons.ppt|Multiple Comparisons]] ||talk || ? ||
||11:40 - 12:00 ||QDEC demonstration ||demo ||? ||
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||1:00 - 2:00 ||[[FsTutorial/QdecGroupAnalysis_freeview|QDEC Tutorial]] ||tutorial ||staff || ||1:20 - 2:00 ||[[FsTutorial/QdecGroupAnalysis_freeview|QDEC Tutorial]] ||tutorial ||staff ||
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||5:00 - 5:15 ||Question and Answer Session (Answers to online questions [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QuestionAnswers|here]]) ||talk ||staff || ||5:00 - 6:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fMRI_intro.ppt|Basics of fMRI Analysis|&do=get]] ||talk || Jon Polimeni ||
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||9:00 - 10:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fMRI_intro.ppt|Basics of fMRI Analysis|&do=get]] ||talk || Jon Polimeni ||
||10:00 - 10:40 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|FSFAST|&do=get]] ||talk ||Doug Greve ||
||10:40 - 11:00 ||'''break''' || ||
||11:00 - 11:40 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|FSFAST|&do=get]] continued ||talk ||Doug Greve ||
||10:00 - 10:15 ||'''break''' || ||
||10:15 - 10:55 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|FSFAST|&do=get]] ||talk ||Doug Greve ||
||10:55 - 11:15 ||'''break''' || ||
||11:15 - 12:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|FSFAST|&do=get]] continued ||talk ||Doug Greve ||
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||11:40 - 12:40 ||[[FsFastTutorialV5.1|FSFAST Tutorial]] ||tutorial ||staff ||
||1:45 - 2:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/fs.multimodal-integration.ppt|Multi-Modal Integration, Part 2|&do=get]] ||talk ||Doug Greve ||
||2:15 - 3:00||[[FsTutorial/MultiModal_freeview|Multi-Modal Integration Tutorial, Part 2]] ||tutorial ||staff ||
||3:00 - 3:20
||'''break''' & [[https://docs.google.com/spreadsheet/viewform?formkey=dDNaOUNxUF90NDJJOWdLNUx3Z2RiMHc6MA|Evaluation]]|| ||
||3:20 - 3:50 ||'''optional technical talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|MRI Acquisition Methods for Morphometry|&do=get]] ||talk ||Andre van der Kouwe ||
||3:50 - 4:20 ||'''optional technical talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/FreeSurfer_Course_Apr_2013_Motion_Correction.pdf|Motion-compensated neuroanatomical imaging|&do=get]] ||talk ||Dylan Tisdall ||
||4:20 - 4:45 || '''optional technical talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/fs.registration.ppt|Registration Methods|&do=get]] || talk || Lilla Zollei ||
||4:45 - 5:15 ||Future Directions ||talk || Bruce Fischl, Lilla Zollei, Ender Konukoglu ||
||5:15 - 5:30 ||
Question and Answer Session (Answers to online questions [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QuestionAnswers|here]]), FsQuiz ||talk ||staff ||
||1:00 - 2:00 ||[[FsFastTutorialV5.1|FSFAST Tutorial]] ||tutorial ||staff ||
||2:00 - 2:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/fs.multimodal-integration.ppt|Multi-Modal Integration, Part 2|&do=get]] ||talk ||Doug Greve ||
||2:30 - 3
:15||[[FsTutorial/MultiModal_freeview|Multi-Modal Integration Tutorial, Part 2]] ||tutorial ||staff ||
||3:15 - 3:35 ||'''break''' & [[https://docs.google.com/spreadsheet/viewform?formkey=dDNaOUNxUF90NDJJOWdLNUx3Z2RiMHc6MA|Evaluation]]|| ||
||3:35 - 4:00 ||'''optional technical talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|MRI Acquisition Methods for Morphometry|&do=get]] ||talk ||Andre van der Kouwe ||
||4:00 - 4:30 ||'''optional technical talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/FreeSurfer_Course_Apr_2013_Motion_Correction.pdf|Motion-compensated neuroanatomical imaging|&do=get]] ||talk ||Dylan Tisdall ||
||4:30 - 5:00 || '''optional technical talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/Nov2013/fs.registration.ppt|Registration Methods|&do=get]] || talk || Lilla Zollei ||
||5:00 - 5:30 ||Future Directions ||talk || Bruce Fischl, Lilla Zollei, Ender Konukoglu ||
||5:30 - 5
:45 ||Question and Answer Session (Answers to online questions [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QuestionAnswers|here]]), FsQuiz ||talk ||staff ||

FreeSurfer Course, May 5-7, 2014
MGH, Charlestown Navy Yard, Building 114, Room D1

8:00 - 9:30am Registration Desk Open

Monday, Nov 4th - Introduction / Single Subject Analysis /Troubleshooting

Time

Title

Type

Lecturer

8:30 - 9:00

optional - Unix Tutorial for FreeSurfer Users

tutorial

Allison Stevens

9:00 - 9:15

optional - Intro to FreeSurfer Jargon

talk

Allison Stevens

9:15 - 9:30

break

9:30 - 10:00

Introduction to Freesurfer

talk

Bruce Fischl

10:00 - 11:00

Analyzing the Individual Subject

talk

Doug Greve

11:00 - 11:20

break

11:20 - 12:05

optional - A Non-physicist's Intro to MR SpinBench

talk

Dylan Tisdall

12:05 - 1:00

Lunch (Suggestions for where to eat)

--

--

1:00 - 1:30

Freeview/Tksurfer demonstration

demo

Doug Greve

1:30 - 2:30

Interaction with Individual Subject Data Tutorial

tutorial

staff

2:30 - 3:00

FreeSurfer Troubleshooting

talk

Bruce Fischl

3:00 - 3:20

break

3:20 - 4:00

Quality Checking a Recon

demo

Allison Stevens

4:00 - 5:00

Troubleshooting Tutorial

tutorial

staff

5:00 - 5:15

Question and Answer Session (Answers to online questions here)

talk

staff

Boston Beer Works location information here and here.
Meet us at 6:10pm at the front of Building 149 (map to be provided soon).
If you miss us, we are taking the 6:15pm MGH/Navy Yard shuttle to North Station (the next few buses depart at 6:30pm, 6:45pm, 7pm, 7:15pm, and 7:45pm).
From there, you cross the street and go down Canal Street. Boston Beer Works will be on your right.

Tuesday, Nov 5th - Group Analysis / ROI Analysis / Multimodal

Time

Title

Type

Lecturer

9:00 - 9:40

Surface-based Analysis: Intersubject Smoothing & Registration

talk

Doug Greve

9:40 - 10:20

Group Analysis

talk

?

10:20 - 10:40

break

10:40 - 11:20

Group Analysis Tutorial

tutorial

staff

11:20 - 11:40

Multiple Comparisons

talk

?

11:40 - 12:00

QDEC demonstration

demo

?

12:00 - 1:00

Lunch

--

--

1:00 - 1:20

Multiple Comparisons Tutorial

tutorial

staff

1:20 - 2:00

QDEC Tutorial

tutorial

staff

2:00 - 3:00

ROI Analysis

talk

Doug Greve

3:00 - 3:20

break

3:20 - 3:50

ROI Analysis Tutorial

tutorial

staff

3:50 - 4:20

Longitudinal FreeSurfer see also: LongitudinalProcessing

talk

Martin Reuter

4:20 - 5:00

Longitudinal Tutorial

tutorial

staff

5:00 - 6:00

Basics of fMRI Analysis

talk

Jon Polimeni

Wednesday, May 7th - fMRI / Multimodal / Longitudinal / Future Directions / Q&A

Time

Title

Type

Lecturer

9:00 - 9:30

Multi-Modal Integration, Part 1

talk

Doug Greve

9:30 - 10:00

Multi-Modal Integration Tutorial, Part 1

tutorial

staff

10:00 - 10:15

break

10:15 - 10:55

FSFAST

talk

Doug Greve

10:55 - 11:15

break

11:15 - 12:00

FSFAST continued

talk

Doug Greve

12:00 - 1:00

Lunch

--

--

1:00 - 2:00

FSFAST Tutorial

tutorial

staff

2:00 - 2:30

Multi-Modal Integration, Part 2

talk

Doug Greve

2:30 - 3:15

Multi-Modal Integration Tutorial, Part 2

tutorial

staff

3:15 - 3:35

break & Evaluation

3:35 - 4:00

optional technical talk - MRI Acquisition Methods for Morphometry

talk

Andre van der Kouwe

4:00 - 4:30

optional technical talk - Motion-compensated neuroanatomical imaging

talk

Dylan Tisdall

4:30 - 5:00

optional technical talk - Registration Methods

talk

Lilla Zollei

5:00 - 5:30

Future Directions

talk

Bruce Fischl, Lilla Zollei, Ender Konukoglu

5:30 - 5:45

Question and Answer Session (Answers to online questions here), FsQuiz

talk

staff

FsTutorial/May2014CourseSchedule (last edited 2017-09-26 11:36:15 by MorganFogarty)