FreeSurfer Course, May 5-7, 2014
MGH, Charlestown Navy Yard, Building 114, Room D1

8:00 - 9:30am Registration Desk Open

Monday, May 5th - Introduction / Single Subject Analysis /Troubleshooting

Time

Title

Type

Lecturer

8:30 - 9:00

optional - Unix Tutorial for FreeSurfer Users

tutorial

Ender Konukoglu

9:00 - 9:15

optional - Intro to FreeSurfer Jargon

talk

Ender Konukoglu

9:15 - 9:30

break

9:30 - 10:00

Introduction to Freesurfer

talk

Bruce Fischl

10:00 - 11:00

Analyzing the Individual Subject

talk

Bruce Fischl

11:00 - 11:20

break

11:20 - 12:00

optional - A Non-physicist's Intro to MR SpinBench

talk

Dylan Tisdall

12:00 - 1:00

Lunch (Suggestions for where to eat)

--

--

1:00 - 1:20

Freeview demonstration

demo

Louis Vinke

1:20 - 2:20

Interaction with Individual Subject Data Tutorial

tutorial

staff

2:20 - 2:50

FreeSurfer Troubleshooting

talk

Bruce Fischl

2:50 - 3:10

break

3:10 - 3:50

Quality Checking a Recon

demo

Allison Stevens

3:50 - 4:50

Troubleshooting Tutorial

tutorial

staff

4:50 - 5:00

Question and Answer Session (Answers to online questions here)

talk

staff

Boston Beer Works location information here and here.
Meet us at 6:10pm at the front of Building 149 (map to be provided soon).
If you miss us, we are taking the 6:15pm MGH/Navy Yard shuttle to North Station (the next few buses depart at 6:30pm, 6:45pm, 7pm, 7:15pm, and 7:45pm).
From there, you cross the street and go down Canal Street. Boston Beer Works will be on your right.

Tuesday, May 6th - Group Analysis / ROI Analysis / Multimodal

Time

Title

Type

Lecturer

9:00 - 9:40

Surface-based Analysis: Intersubject Smoothing & Registration

talk

Doug Greve

9:40 - 10:20

Group Analysis

talk

Ender Konukoglu

10:20 - 10:40

break

10:40 - 11:20

Group Analysis Tutorial

tutorial

staff

11:20 - 11:40

Multiple Comparisons

talk

Doug Greve

11:40 - 12:00

QDEC demonstration

demo

Doug Greve

12:00 - 1:00

Lunch

--

--

1:00 - 1:20

Multiple Comparisons Tutorial

tutorial

staff

1:20 - 2:00

QDEC Tutorial

tutorial

staff

2:00 - 2:30

ROI Analysis

talk

Martin Reuter

2:30 - 2:50

break

2:50 - 3:20

ROI Analysis Tutorial

tutorial

staff

3:20 - 3:50

Longitudinal FreeSurfer see also: LongitudinalProcessing

talk

Martin Reuter

3:50 - 4:30

Longitudinal Tutorial

tutorial

staff

4:30 - 5:30

Basics of fMRI Analysis

talk

Jon Polimeni

Wednesday, May 7th - fMRI / Multimodal / Longitudinal / Future Directions / Q&A

Time

Title

Type

Lecturer

9:00 - 9:45

FSFAST

talk

Doug Greve

9:45 - 10:00

break

10:00 - 10:40

FSFAST

talk

Doug Greve

10:40 - 11:40

FSFAST Tutorial

tutorial

staff

11:40 - 12:40

Lunch

--

--

12:40 - 1:40

Multi-Modal Integration, Part 1

talk

Lilla Zollei

1:40 - 2:55

Multi-Modal Integration Tutorial

tutorial

staff

2:55 - 3:15

break & Evaluation

3:15 - 3:45

Future Directions

talk

Bruce Fischl, Lilla Zollei, Ender Konukoglu

3:45 - 4:15

optional technical talk - MRI Acquisition Methods for Morphometry

talk

Andre van der Kouwe

4:15 - 4:45

optional technical talk - Motion-compensated neuroanatomical imaging

talk

Dylan Tisdall

4:45 - 5:15

optional technical talk - Registration Methods

talk

Lilla Zollei

5:15 - 5:30

Question and Answer Session (Answers to online questions here), FsQuiz

talk

staff