FreeSurfer Course, May 5-7, 2014
MGH, Charlestown Navy Yard, Building 114, Room D1

8:00 - 9:30am Registration Desk Open

Monday, Nov 4th - Introduction / Single Subject Analysis /Troubleshooting

Time

Title

Type

Lecturer

8:30 - 9:00

optional - Unix Tutorial for FreeSurfer Users

tutorial

Allison Stevens

9:00 - 9:15

optional - Intro to FreeSurfer Jargon

talk

Allison Stevens

9:15 - 9:30

break

9:30 - 10:00

Introduction to Freesurfer

talk

Bruce Fischl

10:00 - 11:00

Analyzing the Individual Subject

talk

Doug Greve

11:00 - 11:20

break

11:20 - 12:05

optional - A Non-physicist's Intro to MR SpinBench

talk

Dylan Tisdall

12:05 - 1:00

Lunch (Suggestions for where to eat)

--

--

1:00 - 1:30

Freeview/Tksurfer demonstration

demo

Doug Greve

1:30 - 2:30

Interaction with Individual Subject Data Tutorial

tutorial

staff

2:30 - 3:00

FreeSurfer Troubleshooting

talk

Bruce Fischl

3:00 - 3:20

break

3:20 - 4:00

Quality Checking a Recon

demo

Allison Stevens

4:00 - 5:00

Troubleshooting Tutorial

tutorial

staff

5:00 - 5:15

Question and Answer Session (Answers to online questions here)

talk

staff

Boston Beer Works location information here and here.
Meet us at 6:10pm at the front of Building 149 (map to be provided soon).
If you miss us, we are taking the 6:15pm MGH/Navy Yard shuttle to North Station (the next few buses depart at 6:30pm, 6:45pm, 7pm, 7:15pm, and 7:45pm).
From there, you cross the street and go down Canal Street. Boston Beer Works will be on your right.

Tuesday, Nov 5th - Group Analysis / ROI Analysis / Multimodal

Time

Title

Type

Lecturer

9:00 - 9:40

Surface-based Analysis: Intersubject Smoothing & Registration

talk

Doug Greve

9:40 - 10:20

Group Analysis

talk

?

10:20 - 10:40

break

10:40 - 11:20

Group Analysis Tutorial

tutorial

staff

11:20 - 11:40

Multiple Comparisons

talk

?

11:40 - 12:00

QDEC demonstration

demo

?

12:00 - 1:00

Lunch

--

--

1:00 - 1:20

Multiple Comparisons Tutorial

tutorial

staff

1:20 - 2:00

QDEC Tutorial

tutorial

staff

2:00 - 3:00

ROI Analysis

talk

Doug Greve

3:00 - 3:20

break

3:20 - 3:50

ROI Analysis Tutorial

tutorial

staff

3:50 - 4:20

Longitudinal FreeSurfer see also: LongitudinalProcessing

talk

Martin Reuter

4:20 - 5:00

Longitudinal Tutorial

tutorial

staff

5:00 - 6:00

Basics of fMRI Analysis

talk

Jon Polimeni

Wednesday, May 7th - fMRI / Multimodal / Longitudinal / Future Directions / Q&A

Time

Title

Type

Lecturer

9:00 - 9:30

Multi-Modal Integration, Part 1

talk

Doug Greve

9:30 - 10:00

Multi-Modal Integration Tutorial, Part 1

tutorial

staff

10:00 - 10:15

break

10:15 - 10:55

FSFAST

talk

Doug Greve

10:55 - 11:15

break

11:15 - 12:00

FSFAST continued

talk

Doug Greve

12:00 - 1:00

Lunch

--

--

1:00 - 2:00

FSFAST Tutorial

tutorial

staff

2:00 - 2:30

Multi-Modal Integration, Part 2

talk

Doug Greve

2:30 - 3:15

Multi-Modal Integration Tutorial, Part 2

tutorial

staff

3:15 - 3:35

break & Evaluation

3:35 - 4:00

Future Directions

talk

Bruce Fischl, Lilla Zollei, Ender Konukoglu

4:00 - 4:30

optional technical talk - MRI Acquisition Methods for Morphometry

talk

Andre van der Kouwe

4:30 - 5:00

optional technical talk - Motion-compensated neuroanatomical imaging

talk

Dylan Tisdall

5:00 - 5:30

optional technical talk - Registration Methods

talk

Lilla Zollei

5:30 - 5:45

Question and Answer Session (Answers to online questions here), FsQuiz

talk

staff